RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 AGERQ15109 404 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 RALGPS1Q5JS13 557 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 NAPEPLDQ6IQ20 393 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 ZSWIM9Q86XI8 627 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 MINDY1Q8N5J2 469 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 MFSD2AQ8NA29 543 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 ACRBPQ8NEB7 543 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 HDAC11Q96DB2 347 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 OLFM3Q96PB7 478 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 LENG8Q96PV6 779 aaPredicted RBP13.87□□□□□ -0.19
CD9-208ENST00000538834 KLF6Q99612 283 aaPredicted RBP13.87□□□□□ -0.19
CD9-208ENST00000538834 CALN1Q9BXU9 219 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 GOLPH3Q9H4A6 298 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 SP110Q9HB58 689 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 KLHL11Q9NVR0 708 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 DDX56Q9NY93 547 aaKnown RBP13.87□□□□□ -0.19
CD9-208ENST00000538834 SEPT3Q9UH03 358 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 AMACRQ9UHK6 382 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 HYOU1Q9Y4L1 999 aa13.87□□□□□ -0.19
CD9-208ENST00000538834 ARHGEF17Q96PE2 2063 aaPredicted RBP13.87□□□□□ -0.19
CD9-208ENST00000538834 SPEGQ15772 3267 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 A0A1B0GVT2 93 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 A0A1W2PQU0 124 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 FAM47DPA6NHR8 397 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 TMEM110-MUSTN1A8MSY1 372 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 MATN3O15232 486 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 TSPAN6O43657 245 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 CFIP05156 583 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 CSRP1P21291 193 aaKnown RBP13.86□□□□□ -0.19
CD9-208ENST00000538834 PEX5P50542 639 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 RENBPP51606 427 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 IFI16Q16666 785 aaKnown RBP13.86□□□□□ -0.19
CD9-208ENST00000538834 KIF19Q2TAC6 998 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 TMEM52BQ4KMG9 183 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 KIAA1161Q6NSJ0 714 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 MFSD7Q6UXD7 560 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 ERMP1Q7Z2K6 904 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 PRPF39Q86UA1 669 aaKnown RBP13.86□□□□□ -0.19
CD9-208ENST00000538834 KATNAL2Q8IYT4 538 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 CBARPQ8N350 705 aaPredicted RBP13.86□□□□□ -0.19
CD9-208ENST00000538834 EXOC2Q96KP1 924 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 SLC6A18Q96N87 628 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 NUDCD1Q96RS6 583 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 MIR1-1HGQ9H1L0 117 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 LUC7LQ9NQ29 371 aaKnown RBP13.86□□□□□ -0.19
CD9-208ENST00000538834 ANKRD6Q9Y2G4 727 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 PPIL1Q9Y3C6 166 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 PLXNB3Q9ULL4 1909 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 KNTC1P50748 2209 aa13.86□□□□□ -0.19
CD9-208ENST00000538834 NCOR2Q9Y618 2525 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 A0A0U1RQJ8 604 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 LRRD1A4D1F6 860 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 PRAMEF26H0Y7S4 382 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 FZD6O60353 706 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 PIGNO95427 931 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 CD38P28907 300 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 SSR1P43307 286 aaKnown RBP13.85□□□□□ -0.19
CD9-208ENST00000538834 AP1S1P61966 158 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 ADCY2Q08462 1091 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 PPIDQ08752 370 aaKnown RBP13.85□□□□□ -0.19
CD9-208ENST00000538834 OVGP1Q12889 678 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 SHBQ15464 509 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 UGP2Q16851 508 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 SETMARQ53H47 684 aaPredicted RBP13.85□□□□□ -0.19
CD9-208ENST00000538834 FBXL19Q6PCT2 694 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 BRAT1Q6PJG6 821 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 IL27RAQ6UWB1 636 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 ABI3BPQ7Z7G0 1075 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 SPATS2Q86XZ4 545 aaKnown RBP13.85□□□□□ -0.19
CD9-208ENST00000538834 ZNF354CQ86Y25 554 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 ATPAF2Q8N5M1 289 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 SPC24Q8NBT2 197 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 OR2I1PQ8NGU4 316 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 FEM1CQ96JP0 617 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 BMFQ96LC9 184 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 IL12RB2Q99665 862 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 ERVMER34-1Q9H9K5 563 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 DYRK4Q9NR20 520 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 GGT7Q9UJ14 662 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 ATP8A1Q9Y2Q0 1164 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 PCDHGB2Q9Y5G2 931 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 PCDHA3Q9Y5H8 950 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 SNX11Q9Y5W9 270 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 HS3ST3A1Q9Y663 406 aa13.85□□□□□ -0.19
CD9-208ENST00000538834 GRID2IPA4D2P6 1211 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 CFAP69A5D8W1 941 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
CD9-208ENST00000538834 SOCS5O75159 536 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 ITIH2P19823 946 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 CTNNA2P26232 953 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 CTNNA1P35221 906 aaKnown RBP13.84□□□□□ -0.19
CD9-208ENST00000538834 GJC1P36383 396 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 MAPK8P45983 427 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 NOP2P46087 812 aaKnown RBP13.84□□□□□ -0.19
CD9-208ENST00000538834 RXRGP48443 463 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 MARCKSL1P49006 195 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 GSDMDP57764 484 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 RPS21P63220 83 aaKnown RBP13.84□□□□□ -0.19
CD9-208ENST00000538834 HLA-BQ31612 363 aa13.84□□□□□ -0.19
CD9-208ENST00000538834 MARC1Q5VT66 337 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms