RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SLC25A12O75746 678 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 SLC25A14O95258 325 aaPredicted RBP16.93■□□□□ 0.3
SCARB1-205ENST00000538291 GRM3Q14832 879 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 PLPP4Q5VZY2 271 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 CNSTQ6PJW8 725 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 MOB2Q70IA6 237 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 EIF3MQ7L2H7 374 aaKnown RBP16.93■□□□□ 0.3
SCARB1-205ENST00000538291 RASAL3Q86YV0 1011 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 ZC3H7AQ8IWR0 971 aaKnown RBP16.93■□□□□ 0.3
SCARB1-205ENST00000538291 ULK2Q8IYT8 1036 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 TLE6Q9H808 572 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 GDF3Q9NR23 364 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 DDX20Q9UHI6 824 aaKnown RBP16.93■□□□□ 0.3
SCARB1-205ENST00000538291 ASF1AQ9Y294 204 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 ACTL7BQ9Y614 415 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 H7C0S8 307 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 ATP9AO75110 1047 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 NR2F1P10589 423 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 CDC42P60953 191 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 FAM220AQ7Z4H9 259 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 ARMC8Q8IUR7 673 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 IZUMO1Q8IYV9 350 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 FBXO30Q8TB52 745 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 SNRNP27Q8WVK2 155 aaKnown RBP16.93■□□□□ 0.3
SCARB1-205ENST00000538291 FANCEQ9HB96 536 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 MRPS33Q9Y291 106 aaKnown RBP16.93■□□□□ 0.3
SCARB1-205ENST00000538291 PCDHGC5Q9Y5F6 944 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 COL5A2P05997 1499 aaPredicted RBP16.93■□□□□ 0.3
SCARB1-205ENST00000538291 OTCP00480 354 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 FGF1P05230 155 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 GOT1P17174 413 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 CTPS1P17812 591 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 ERCC2P18074 760 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 GSTM5P46439 218 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 MAPKAPK3Q16644 382 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 SLC44A4Q53GD3 710 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 SMYD1Q8NB12 490 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 OR10G6Q8NH81 332 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 PPTC7Q8NI37 304 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 ZSCAN18Q8TBC5 510 aaPredicted RBP16.93■□□□□ 0.3
SCARB1-205ENST00000538291 TRPM4Q8TD43 1214 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 HEXDCQ8WVB3 486 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 EXOC2Q96KP1 924 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 MYOCQ99972 504 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 ASTN1O14525 1302 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 PTGES3LE9PB15 166 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 SMIM11AP58511 58 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 ATP6V0D1P61421 351 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 ITGA7Q13683 1181 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 FOXR1Q6PIV2 292 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 TXNDC11Q6PKC3 985 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 BEND7Q8N7W2 519 aaPredicted RBP16.93■□□□□ 0.3
SCARB1-205ENST00000538291 GAS2L1Q99501 681 aaPredicted RBP16.93■□□□□ 0.3
SCARB1-205ENST00000538291 TTLL2Q9BWV7 592 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 SAR1AQ9NR31 198 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 TAS2R14Q9NYV8 317 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 GPN3Q9UHW5 284 aaPredicted RBP16.93■□□□□ 0.3
SCARB1-205ENST00000538291 DERAQ9Y315 318 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 STON1Q9Y6Q2 735 aa16.93■□□□□ 0.3
SCARB1-205ENST00000538291 TBC1D3DA0A087WVF3 549 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 TBC1D3IA0A087WXS9 549 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 TBC1D3EA0A087X179 549 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 TBC1D3KA0A087X1G2 549 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 SMIM35A0A1B0GVV1 85 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 TBC1D3FA6NER0 549 aaPredicted RBP16.92■□□□□ 0.3
SCARB1-205ENST00000538291 TBC1D3LB9A6J9 549 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 NT5C1B-RDH14C9J2C7 533 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 AVILO75366 819 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 TBC1D3HP0C7X1 549 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 TSHRP16473 764 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 ITGAXP20702 1163 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 EPS8Q12929 822 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 TBC1D3GQ6DHY5 549 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 TBC1D3CQ6IPX1 549 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 PACS1Q6VY07 963 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 APTXQ7Z2E3 356 aaKnown RBP16.92■□□□□ 0.3
SCARB1-205ENST00000538291 TBC1D3Q8IZP1 549 aaPredicted RBP16.92■□□□□ 0.3
SCARB1-205ENST00000538291 ADGRG2Q8IZP9 1017 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 DLG3Q92796 817 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 MIEF2Q96C03 454 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 LEF1Q9UJU2 399 aaPredicted RBP16.92■□□□□ 0.3
SCARB1-205ENST00000538291 SLC9A8Q9Y2E8 581 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 PNMA8CA0A1B0GUJ8 204 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 GTPBP1O00178 669 aaKnown RBP16.92■□□□□ 0.3
SCARB1-205ENST00000538291 B4GALT5O43286 388 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 RPL22P35268 128 aaKnown RBP16.92■□□□□ 0.3
SCARB1-205ENST00000538291 RAB10P61026 200 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 RALGDSQ12967 914 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 HYIQ5T013 277 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 FAAH2Q6GMR7 532 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 ZCCHC7Q8N3Z6 543 aaKnown RBP16.92■□□□□ 0.3
SCARB1-205ENST00000538291 CERS5Q8N5B7 392 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 AADATQ8N5Z0 425 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 ALLCQ8N6M5 410 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 CLEC4MQ9H2X3 399 aaPredicted RBP16.92■□□□□ 0.3
SCARB1-205ENST00000538291 MRPL39Q9NYK5 338 aaKnown RBP16.92■□□□□ 0.3
SCARB1-205ENST00000538291 MYRFQ9Y2G1 1151 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 COL1A2P08123 1366 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 H0Y858 1186 aa16.92■□□□□ 0.3
SCARB1-205ENST00000538291 CAPN15O75808 1086 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms