RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 ACMSDQ8TDX5 336 aa10.87□□□□□ -0.67
CLIP1-210ENST00000538120 DIS3LQ8TF46 1054 aaKnown RBP10.87□□□□□ -0.67
CLIP1-210ENST00000538120 FATE1Q969F0 183 aa10.87□□□□□ -0.67
CLIP1-210ENST00000538120 MRGPRX2Q96LB1 330 aa10.87□□□□□ -0.67
CLIP1-210ENST00000538120 FAM161BQ96MY7 647 aa10.87□□□□□ -0.67
CLIP1-210ENST00000538120 CPNE1Q99829 537 aa10.87□□□□□ -0.67
CLIP1-210ENST00000538120 FICDQ9BVA6 458 aa10.87□□□□□ -0.67
CLIP1-210ENST00000538120 IQCGQ9H095 443 aaKnown RBP10.87□□□□□ -0.67
CLIP1-210ENST00000538120 SIRPGQ9P1W8 387 aa10.87□□□□□ -0.67
CLIP1-210ENST00000538120 TSR3Q9UJK0 312 aaKnown RBP10.87□□□□□ -0.67
CLIP1-210ENST00000538120 HNRNPCL1O60812 293 aaKnown RBP10.86□□□□□ -0.67
CLIP1-210ENST00000538120 DNAJC6O75061 913 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 IL1BP01584 269 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 PGM1P36871 562 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 GMPRP36959 345 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 MAGEA12P43365 314 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 GEMP55040 296 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 OCRLQ01968 901 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 PPM1JQ5JR12 505 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 C16orf46Q6P387 395 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 KDELC1Q6UW63 502 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 RANBP10Q6VN20 620 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 STRA8Q7Z7C7 330 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 ZNF784Q8NCA9 323 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-210ENST00000538120 ISL2Q96A47 359 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 KLHL5Q96PQ7 755 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 RBBP8Q99708 897 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 RSPH9Q9H1X1 276 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-210ENST00000538120 STX18Q9P2W9 335 aaKnown RBP10.86□□□□□ -0.67
CLIP1-210ENST00000538120 MTO1Q9Y2Z2 717 aaKnown RBP10.86□□□□□ -0.67
CLIP1-210ENST00000538120 AP3B1O00203 1094 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 ENO1P06733 434 aaKnown RBP10.86□□□□□ -0.67
CLIP1-210ENST00000538120 UBTFL6P0CB48 400 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-210ENST00000538120 KITP10721 976 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 HMGA1P17096 107 aaKnown RBP10.86□□□□□ -0.67
CLIP1-210ENST00000538120 SLC10A7Q0GE19 358 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 HNRNPDQ14103 355 aaKnown RBP10.86□□□□□ -0.67
CLIP1-210ENST00000538120 IKBKEQ14164 716 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 PCID2Q5JVF3 399 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 STXBP5Q5T5C0 1151 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 CWF19L1Q69YN2 538 aaKnown RBP10.86□□□□□ -0.67
CLIP1-210ENST00000538120 PKN3Q6P5Z2 889 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 CNKSR3Q6P9H4 555 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 TMCO2Q7Z6W1 182 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-210ENST00000538120 KCNMB4Q86W47 210 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 DCLK2Q8N568 766 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 TEX26Q8N6G2 289 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 ACVR1CQ8NER5 493 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 STMN2Q93045 179 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 ATP2A3Q93084 1043 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 PSMG2Q969U7 264 aa10.86□□□□□ -0.67
CLIP1-210ENST00000538120 C20orf96Q9NUD7 363 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-210ENST00000538120 MARCOQ9UEW3 520 aaPredicted RBP10.86□□□□□ -0.67
CLIP1-210ENST00000538120 CCDC195A0A1B0GUA6 201 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 CCDC78A2IDD5 438 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 B2RBV5 119 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 PMPCBO75439 489 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 GJB5O95377 273 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 BPGMP07738 259 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 MMP2P08253 660 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 TACR2P21452 398 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 ABCG1P45844 678 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 LIMK2P53671 638 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 PTPN5P54829 565 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 TNK2Q07912 1038 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 ANO4Q32M45 955 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 C1orf53Q5VUE5 145 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 AP1ARQ63HQ0 302 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 SLC25A41Q8N5S1 370 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.85□□□□□ -0.67
CLIP1-210ENST00000538120 RBM15BQ8NDT2 890 aaKnown RBP10.85□□□□□ -0.67
CLIP1-210ENST00000538120 GATA6Q92908 595 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 ZNF689Q96CS4 500 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-210ENST00000538120 IMP4Q96G21 291 aaKnown RBP10.85□□□□□ -0.67
CLIP1-210ENST00000538120 SLC25A51Q9H1U9 297 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 IARS2Q9NSE4 1012 aaKnown RBP10.85□□□□□ -0.67
CLIP1-210ENST00000538120 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.85□□□□□ -0.67
CLIP1-210ENST00000538120 ZNF840PA6NDX5 716 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 GOLGA8TH3BQL2 631 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 ABLIM3O94929 683 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 SNUPNO95149 360 aaKnown RBP10.85□□□□□ -0.67
CLIP1-210ENST00000538120 TGDSO95455 350 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 ZCCHC18P0CG32 403 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 ARNTP27540 789 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 SLC6A4P31645 630 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 ACVRL1P37023 503 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 CHRNA4P43681 627 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 TUFMP49411 452 aaKnown RBP10.85□□□□□ -0.67
CLIP1-210ENST00000538120 POLE2P56282 527 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 WNT3AP56704 352 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 KDSRQ06136 332 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 BST1Q10588 318 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 POU6F1Q14863 301 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 KRT72Q14CN4 511 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 C5orf22Q49AR2 442 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 N4BP2L1Q5TBK1 243 aaPredicted RBP10.85□□□□□ -0.67
CLIP1-210ENST00000538120 FSTL4Q6MZW2 842 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 KYAT3Q6YP21 454 aaKnown RBP10.85□□□□□ -0.67
CLIP1-210ENST00000538120 CMC1Q7Z7K0 106 aa10.85□□□□□ -0.67
CLIP1-210ENST00000538120 CCDC117Q8IWD4 279 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms