RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 PCDHB7Q9Y5E2 793 aa8.79□□□□□ -1
UBE3B-208ENST00000538070 LRRC14BA6NHZ5 514 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 TMEM88BA6NKF7 163 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 ERI2A8K979 691 aaKnown RBP8.78□□□□□ -1
UBE3B-208ENST00000538070 CA12O43570 354 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 TLR5O60602 858 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 SPATA31D3P0C874 917 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 KCNA5P22460 613 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 GLDCP23378 1020 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 RENBPP51606 427 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 SEMG2Q02383 582 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 MS4A13Q5J8X5 152 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 RASIP1Q5U651 963 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 TRIM67Q6ZTA4 783 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 SPATA31D4Q6ZUB0 917 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 SLC24A5Q71RS6 500 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 MON1AQ86VX9 555 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 SPATA24Q86W54 205 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 DENND1CQ8IV53 801 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 GALNT4Q8N4A0 578 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 OR6K2Q8NGY2 324 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 SH3RF2Q8TEC5 729 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 APBB2Q92870 758 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 DNAJC1Q96KC8 554 aaKnown RBP8.78□□□□□ -1
UBE3B-208ENST00000538070 ZYG11BQ9C0D3 744 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 TRPC7Q9HCX4 862 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 MARCH4Q9P2E8 410 aaPredicted RBP8.78□□□□□ -1
UBE3B-208ENST00000538070 Q9Y3F1 56 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 PCDHB12Q9Y5F1 795 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 TRAFD1O14545 582 aaPredicted RBP8.78□□□□□ -1
UBE3B-208ENST00000538070 ADAMTS4O75173 837 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 ALDH2P05091 517 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 PIK3R1P27986 724 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 MRPS22P82650 360 aaKnown RBP8.78□□□□□ -1
UBE3B-208ENST00000538070 PLIN5Q00G26 463 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 UGP2Q16851 508 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 LIPMQ5VYY2 423 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 RNF19BQ6ZMZ0 732 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 GK5Q6ZS86 529 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 TAS1R1Q7RTX1 841 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 DDIASQ8IXT1 998 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.78□□□□□ -1
UBE3B-208ENST00000538070 CENPLQ8N0S6 344 aaPredicted RBP8.78□□□□□ -1
UBE3B-208ENST00000538070 PCSK9Q8NBP7 692 aaKnown RBP8.78□□□□□ -1
UBE3B-208ENST00000538070 OLFM1Q99784 485 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 CRISPLD1Q9H336 500 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 CSNK1G1Q9HCP0 422 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 OXSMQ9NWU1 459 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 NCKIPSDQ9NZQ3 722 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 ARHGAP26Q9UNA1 814 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 CRCPO75575 148 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 RAG1P15918 1043 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 HCAR3P49019 387 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 AIF1P55008 147 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 CSE1LP55060 971 aaKnown RBP8.78□□□□□ -1
UBE3B-208ENST00000538070 KLC1Q07866 573 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 MBTPS1Q14703 1052 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 PPP1R3AQ16821 1122 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 KIF19Q2TAC6 998 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 TMEM173Q86WV6 379 aaPredicted RBP8.78□□□□□ -1
UBE3B-208ENST00000538070 KBTBD2Q8IY47 623 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 TXNDC5Q8NBS9 432 aaKnown RBP8.78□□□□□ -1
UBE3B-208ENST00000538070 OSBPL2Q9H1P3 480 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 ENTPD7Q9NQZ7 604 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 PTGDR2Q9Y5Y4 395 aa8.78□□□□□ -1
UBE3B-208ENST00000538070 KIAA0100Q14667 2235 aaKnown RBP8.78□□□□□ -1
UBE3B-208ENST00000538070 A0A088AWK7 358 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 HDAC3O15379 428 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 WFS1O76024 890 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 SIX3O95343 332 aaPredicted RBP8.77□□□□□ -1
UBE3B-208ENST00000538070 GFAPP14136 432 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 ITGB6P18564 788 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 FMO4P31512 558 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 SP3Q02447 781 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 MGAT3Q09327 533 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 NFE2Q16621 373 aaPredicted RBP8.77□□□□□ -1
UBE3B-208ENST00000538070 FAM83EQ2M2I3 478 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 PITRM1Q5JRX3 1037 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 BRMS1LQ5PSV4 323 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 DENND5AQ6IQ26 1287 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 ANO7Q6IWH7 933 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 KLC3Q6P597 504 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.77□□□□□ -1
UBE3B-208ENST00000538070 ATP6V0D2Q8N8Y2 350 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 ANKRD49Q8WVL7 239 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 IRGQQ8WZA9 623 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 FCRL5Q96RD9 977 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 GPR22Q99680 433 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 SMOC2Q9H3U7 446 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 RGS18Q9NS28 235 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 CDH22Q9UJ99 828 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 ADAM28Q9UKQ2 775 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 PCDHGC4Q9Y5F7 938 aa8.77□□□□□ -1
UBE3B-208ENST00000538070 DPPA5A6NC42 116 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 FGF10O15520 208 aaPredicted RBP8.77□□□□□ -1.01
UBE3B-208ENST00000538070 ZNF623O75123 536 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 ITGAXP20702 1163 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 OR1D2P34982 312 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 CDK7P50613 346 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 TWF1Q12792 350 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms