RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.08■□□□□ 0.48
DDX55-204ENST00000536079 KLK6Q92876 244 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 FOXJ1Q92949 421 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 FATE1Q969F0 183 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 OSBPL1AQ9BXW6 950 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 MIR1-1HGQ9H1L0 117 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 SUV39H2Q9H5I1 410 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 DYRK4Q9NR20 520 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 PCDHGC4Q9Y5F7 938 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.08■□□□□ 0.48
DDX55-204ENST00000536079 TCRBV7S2A1N4TA0A589 114 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 LRRC72A6NJI9 287 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 ZNF806P0C7X5 589 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 TGM2P21980 687 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 RENBPP51606 427 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 IRX4P78413 519 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 RAD51Q06609 339 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 AP1B1Q10567 949 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 SFSWAPQ12872 951 aaKnown RBP18.07■□□□□ 0.48
DDX55-204ENST00000536079 PDK1Q15118 436 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 PRKD1Q15139 912 aaPredicted RBP18.07■□□□□ 0.48
DDX55-204ENST00000536079 CSRP2Q16527 193 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 MEI1Q5TIA1 1274 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 SEL1L3Q68CR1 1132 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 TIGD7Q6NT04 549 aaPredicted RBP18.07■□□□□ 0.48
DDX55-204ENST00000536079 FBXL19Q6PCT2 694 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 LAYNQ6UX15 382 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 ZCCHC9Q8N567 271 aaKnown RBP18.07■□□□□ 0.48
DDX55-204ENST00000536079 ARRDC2Q8TBH0 407 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 ANP32BQ92688 251 aaKnown RBP18.07■□□□□ 0.48
DDX55-204ENST00000536079 PPP1R16AQ96I34 528 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 NUDCD1Q96RS6 583 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 IL12RB2Q99665 862 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 PCED1AQ9H1Q7 454 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 PYCARDQ9ULZ3 195 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 ZNF292O60281 2723 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 SHROOM3Q8TF72 1996 aa18.07■□□□□ 0.48
DDX55-204ENST00000536079 CFAP54Q96N23 3096 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 A0A1W2PQU0 124 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 TSPAN11A1L157 253 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 MIF4GDA9UHW6 222 aaKnown RBP18.06■□□□□ 0.48
DDX55-204ENST00000536079 NRDCO43847 1150 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 GDF9O60383 454 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 RNGTTO60942 597 aaKnown RBP18.06■□□□□ 0.48
DDX55-204ENST00000536079 NR2C2P49116 596 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 CCR5P51681 352 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 IFI35P80217 286 aaPredicted RBP18.06■□□□□ 0.48
DDX55-204ENST00000536079 BNC1Q01954 994 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 TRAF2Q12933 501 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 FGL2Q14314 439 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 PTPRRQ15256 657 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 WDR45BQ5MNZ6 344 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 SYCP2LQ5T4T6 812 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 ZC3H18Q86VM9 953 aaKnown RBP18.06■□□□□ 0.48
DDX55-204ENST00000536079 UBL4BQ8N7F7 174 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 NSMCE1Q8WV22 266 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 ECHDC3Q96DC8 303 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 SMIM14Q96QK8 99 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 TUBGCP5Q96RT8 1024 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 SEMA3CQ99985 751 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 KDM4CQ9H3R0 1056 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 SCUBE2Q9NQ36 999 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 VPS45Q9NRW7 570 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 TRMT1Q9NXH9 659 aaKnown RBP18.06■□□□□ 0.48
DDX55-204ENST00000536079 SEPT10Q9P0V9 454 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 DKK3Q9UBP4 350 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 CA5BQ9Y2D0 317 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 ATP8A1Q9Y2Q0 1164 aa18.06■□□□□ 0.48
DDX55-204ENST00000536079 A0A1W2PPC4 97 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 USP27XA6NNY8 438 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 AREL1O15033 823 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 LATO43561 262 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 MMP2P08253 660 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 HSPA9P38646 679 aaKnown RBP18.05■□□□□ 0.48
DDX55-204ENST00000536079 AP1S1P61966 158 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 ITKQ08881 620 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 NOMO1Q15155 1222 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 ZNF284Q2VY69 593 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 TRIM61Q5EBN2 209 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 PRR23CQ6ZRP0 262 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 TTC7BQ86TV6 843 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 TRIM69Q86WT6 500 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 ACTL9Q8TC94 416 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 P3H4Q92791 437 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 ZNF641Q96N77 438 aaPredicted RBP18.05■□□□□ 0.48
DDX55-204ENST00000536079 SLC6A18Q96N87 628 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 ATP13A3Q9H7F0 1226 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 PREBQ9HCU5 417 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 EFR3BQ9Y2G0 817 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 R3HDM2Q9Y2K5 976 aaKnown RBP18.05■□□□□ 0.48
DDX55-204ENST00000536079 TTLL3Q9Y4R7 772 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 GVINP1Q7Z2Y8 2422 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 FAM186AA6NE01 2351 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 PIEZO1Q92508 2521 aa18.05■□□□□ 0.48
DDX55-204ENST00000536079 APOC4-APOC2K7ER74 178 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 PPP1R12AO14974 1030 aaPredicted RBP18.04■□□□□ 0.48
DDX55-204ENST00000536079 HTRA2O43464 458 aaPredicted RBP18.04■□□□□ 0.48
DDX55-204ENST00000536079 AP1G1O43747 822 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 LRP3O75074 770 aa18.04■□□□□ 0.48
DDX55-204ENST00000536079 PCDH8O95206 1070 aa18.04■□□□□ 0.48
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