RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 LEKR1Q6ZMV7 388 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 BNIPLQ7Z465 357 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 NLRP14Q86W24 1093 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 GKN2Q86XP6 184 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 PHACTR4Q8IZ21 702 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 SDR16C5Q8N3Y7 309 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 CCDC185Q8N715 623 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 OR6C4Q8NGE1 309 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 JOSD2Q8TAC2 188 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 HCAR2Q8TDS4 363 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 NSMCE1Q8WV22 266 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 BMFQ96LC9 184 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 TBATAQ96M53 351 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 AGPAT1Q99943 283 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 CINPQ9BW66 212 aaPredicted RBP13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 STRADBQ9C0K7 418 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 ATP13A3Q9H7F0 1226 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 POLR1BQ9H9Y6 1135 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 PARVAQ9NVD7 372 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 DKK3Q9UBP4 350 aa13.41□□□□□ -0.26
CLSTN3-205ENST00000535452 ACACAQ13085 2346 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 RASA4BC9J798 803 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 MUSKO15146 869 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 RASA4O43374 803 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 PRPSAP2O60256 369 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 MMP20O60882 483 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 RASGRP1O95267 797 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 MBD3O95983 291 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 MPOP05164 745 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 PSMA2P25787 234 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 GKP32189 559 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 LSSP48449 732 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 PEX5P50542 639 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 ADKP55263 362 aaKnown RBP13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 JAM2P57087 298 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 TPM4P67936 248 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 SOWAHCQ53LP3 525 aaPredicted RBP13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 C3orf38Q5JPI3 329 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 ATXN7L2Q5T6C5 722 aaPredicted RBP13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 CDKAL1Q5VV42 579 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 BRAT1Q6PJG6 821 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 WDR59Q6PJI9 974 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 MACC1Q6ZN28 852 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 LSM14AQ8ND56 463 aaKnown RBP13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 CENPIQ92674 756 aaPredicted RBP13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 NAF1Q96HR8 494 aaKnown RBP13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 ZNF641Q96N77 438 aaPredicted RBP13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 WRAP53Q9BUR4 548 aaKnown RBP13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 CPEB1Q9BZB8 566 aaKnown RBP13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 HAUS2Q9NVX0 235 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 GULP1Q9UBP9 304 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 AKAP13Q12802 2813 aa13.4□□□□□ -0.26
CLSTN3-205ENST00000535452 ANKRD11Q6UB99 2663 aaPredicted RBP13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 CACNB4O00305 520 aaPredicted RBP13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 PDE2AO00408 941 aaPredicted RBP13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 EEF2KO00418 725 aaKnown RBP13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 CCP110O43303 1012 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 ZNF821O75541 412 aaPredicted RBP13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 PALMO75781 387 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 KRT10P13645 584 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 HOXB3P14651 431 aaPredicted RBP13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 ITPKBP27987 946 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 EIF4A3P38919 411 aaKnown RBP13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 ABL2P42684 1182 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 KLK7P49862 253 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 RENBPP51606 427 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 ZNF135P52742 658 aaPredicted RBP13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 NDST2P52849 883 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 PFN3P60673 137 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 PEX6Q13608 980 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 KLHL40Q2TBA0 621 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 MANEALQ5VSG8 457 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 TRNP1Q6NT89 227 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 RD3Q7Z3Z2 195 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 HID1Q8IV36 788 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 SLC39A7Q92504 469 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 TRIM11Q96F44 468 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 HMCESQ96FZ2 354 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 VCPIP1Q96JH7 1222 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 TUBGCP5Q96RT8 1024 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 DPH1Q9BZG8 443 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 SUV39H2Q9H5I1 410 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 NDFIP2Q9NV92 336 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 AKAP7Q9P0M2 348 aaPredicted RBP13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 ZNF212Q9UDV6 495 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 KLQ9UEF7 1012 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 LIMA1Q9UHB6 759 aaKnown RBP13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 ITM2BQ9Y287 266 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 MFHAS1Q9Y4C4 1052 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 URB1O60287 2271 aaKnown RBP13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 CFAP47Q6ZTR5 3102 aa13.39□□□□□ -0.27
CLSTN3-205ENST00000535452 ZFHX4Q86UP3 3567 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 EME2A4GXA9 379 aaPredicted RBP13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 SMTNL1A8MU46 457 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 LMO7DNF2Z398 122 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 FAM72CH0Y354 149 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 RAD51BO15315 384 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 KLK10O43240 276 aa13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 TLX3O43711 291 aaPredicted RBP13.38□□□□□ -0.27
CLSTN3-205ENST00000535452 TNFP01375 233 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms