RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 MTMR9Q96QG7 549 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 VPS35Q96QK1 796 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 NUAK2Q9H093 628 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 PLK2Q9NYY3 685 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 UXTQ9UBK9 157 aaPredicted RBP12.72□□□□□ -0.37
SPG11-203ENST00000535302 PHF11Q9UIL8 331 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 SLC12A4Q9UP95 1085 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 RGS14O43566 566 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 SERPINA4P29622 427 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 BUD31P41223 144 aaPredicted RBP12.72□□□□□ -0.37
SPG11-203ENST00000535302 NRG1Q02297 640 aaPredicted RBP12.72□□□□□ -0.37
SPG11-203ENST00000535302 NWD1Q149M9 1564 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 UNC5AQ6ZN44 842 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 BDH2Q9BUT1 245 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 GANQ9H2C0 597 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 TMLHEQ9NVH6 421 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 PDP2Q9P2J9 529 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 PCDHA11Q9Y5I1 949 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 LDLRP01130 860 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 AXLP30530 894 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 WASP42768 502 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 COPZ1P61923 177 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 UBAP2LQ14157 1087 aaKnown RBP12.72□□□□□ -0.37
SPG11-203ENST00000535302 NDUFA5Q16718 116 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 SPANXN2Q5MJ10 180 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 PMF1Q6P1K2 205 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 ATL1Q8WXF7 558 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 HAS1Q92839 578 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 WNT8BQ93098 351 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 CDADC1Q9BWV3 514 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 MRPL9Q9BYD2 267 aaKnown RBP12.72□□□□□ -0.37
SPG11-203ENST00000535302 CAB39LQ9H9S4 337 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 ERAL1O75616 437 aaKnown RBP12.72□□□□□ -0.37
SPG11-203ENST00000535302 NPR3P17342 541 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 CCNA2P20248 432 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 OMPP47874 163 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 HNMTP50135 292 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 AKR1D1P51857 326 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 GALNT5Q7Z7M9 940 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 TSPAN14Q8NG11 270 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 VANGL1Q8TAA9 524 aaPredicted RBP12.72□□□□□ -0.37
SPG11-203ENST00000535302 KCTD4Q8WVF5 259 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 WDR60Q8WVS4 1066 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 C1orf50Q9BV19 199 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 COMMD9Q9P000 198 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 RABGEF1Q9UJ41 708 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 TRAV19A0A0A6YYK7 116 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 ELNP15502 786 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 TUFMP49411 452 aaKnown RBP12.72□□□□□ -0.37
SPG11-203ENST00000535302 TARBP2Q15633 366 aaKnown RBP12.72□□□□□ -0.37
SPG11-203ENST00000535302 CRTC3Q6UUV7 619 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 ZPBP2Q6X784 338 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 DEF8Q6ZN54 512 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 RBM43Q6ZSC3 357 aaKnown RBP12.72□□□□□ -0.37
SPG11-203ENST00000535302 APOL4Q9BPW4 351 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 NEK6Q9HC98 313 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 DNMT3LQ9UJW3 386 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 ST3GAL5Q9UNP4 418 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 ZNF232Q9UNY5 417 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 U3KQV3 271 aa12.72□□□□□ -0.37
SPG11-203ENST00000535302 MCIDASD6RGH6 385 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 MSI1O43347 362 aaKnown RBP12.71□□□□□ -0.37
SPG11-203ENST00000535302 SLC25A3Q00325 362 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 CTBP1Q13363 440 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 PLPP4Q5VZY2 271 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 KRT74Q7RTS7 529 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 TTC7BQ86TV6 843 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 SELENOMQ8WWX9 145 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 KLHL5Q96PQ7 755 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 SIN3BO75182 1162 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 LINC00032P0C843 101 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 EIF3MQ7L2H7 374 aaKnown RBP12.71□□□□□ -0.37
SPG11-203ENST00000535302 FAM220AQ7Z4H9 259 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 PTGR2Q8N8N7 351 aaPredicted RBP12.71□□□□□ -0.37
SPG11-203ENST00000535302 PSMA8Q8TAA3 256 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 ARHGAP28Q9P2N2 729 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 REREQ9P2R6 1566 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 MEIS2O14770 477 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 PSMD10O75832 226 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 SASH3O75995 380 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 ATP5F1P24539 256 aaPredicted RBP12.71□□□□□ -0.37
SPG11-203ENST00000535302 GRIA3P42263 894 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 CYP4F8P98187 520 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 PSTKQ8IV42 348 aaKnown RBP12.71□□□□□ -0.37
SPG11-203ENST00000535302 SAMD3Q8N6K7 520 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 MAB21L3Q8N8X9 362 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 EPS8L1Q8TE68 723 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 NKD1Q969G9 470 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 ACO2Q99798 780 aaKnown RBP12.71□□□□□ -0.37
SPG11-203ENST00000535302 YDJCA8MPS7 323 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 ISM1B1AKI9 464 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 APOC4-APOC2K7ER74 178 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 DCLK1O15075 740 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 MDM4O15151 490 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 TIPRLO75663 272 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 APOC2P02655 101 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 CCNB1P14635 433 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 PPP2R2BQ00005 443 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 AMPD2Q01433 879 aa12.71□□□□□ -0.37
SPG11-203ENST00000535302 SPIBQ01892 262 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms