RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 BZW2Q9Y6E2 419 aaKnown RBP10.57□□□□□ -0.72
CAPN1-225ENST00000533704 PKD1L2Q7Z442 2459 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 A0A087X0T9 212 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 FAM221BA6H8Z2 402 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 TRIM38O00635 465 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 SPINT1O43278 529 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 PALMO75781 387 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 GYPCP04921 128 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 TPM3P06753 285 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 FAM228BP0C875 321 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 TCF4P15884 667 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 TIMP2P16035 220 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 AMPD1P23109 780 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 IL1R2P27930 398 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 CASP14P31944 242 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 GJC1P36383 396 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 ARL4AP40617 200 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 DAB2P98082 770 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 SEMG2Q02383 582 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 PDE1CQ14123 709 aaPredicted RBP10.56□□□□□ -0.72
CAPN1-225ENST00000533704 SKOR2Q2VWA4 1001 aaPredicted RBP10.56□□□□□ -0.72
CAPN1-225ENST00000533704 CCDC122Q5T0U0 273 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 KYAT3Q6YP21 454 aaKnown RBP10.56□□□□□ -0.72
CAPN1-225ENST00000533704 ARHGAP36Q6ZRI8 547 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 CYP4V2Q6ZWL3 525 aaPredicted RBP10.56□□□□□ -0.72
CAPN1-225ENST00000533704 KANSL1Q7Z3B3 1105 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 ARHGAP12Q8IWW6 846 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 TP53INP2Q8IXH6 220 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 GALNT15Q8N3T1 639 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 NPWQ8N729 165 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 SYN2Q92777 582 aaPredicted RBP10.56□□□□□ -0.72
CAPN1-225ENST00000533704 CINPQ9BW66 212 aaPredicted RBP10.56□□□□□ -0.72
CAPN1-225ENST00000533704 C1QTNF2Q9BXJ5 285 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 PDFQ9HBH1 243 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 UCKL1Q9NWZ5 548 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 CWC15Q9P013 229 aaKnown RBP10.56□□□□□ -0.72
CAPN1-225ENST00000533704 COQ6Q9Y2Z9 468 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 MFHAS1Q9Y4C4 1052 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 HS3ST3A1Q9Y663 406 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 ASXL3Q9C0F0 2248 aa10.56□□□□□ -0.72
CAPN1-225ENST00000533704 RP1P56715 2156 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 AREL1O15033 823 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 SIGLEC6O43699 453 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 PIAS2O75928 621 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 NEBLO76041 1014 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 TM7SF2O76062 418 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 DKK1O94907 266 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 PRKCGP05129 697 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 JUPP14923 745 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 DGKAP23743 735 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 PCK1P35558 622 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 RABIFP47224 123 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 RGRP47804 291 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 ACADVLP49748 655 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 THOP1P52888 689 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 DPYSQ14117 519 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 PIGHQ14442 188 aaPredicted RBP10.55□□□□□ -0.72
CAPN1-225ENST00000533704 KRT81Q14533 505 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 TXNRD3NBQ6F5E7 133 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 ALKBH5Q6P6C2 394 aaKnown RBP10.55□□□□□ -0.72
CAPN1-225ENST00000533704 TMCO3Q6UWJ1 677 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 SRLQ86TD4 932 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 ZSCAN30Q86W11 494 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 CAMK1DQ8IU85 385 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 PSTKQ8IV42 348 aaKnown RBP10.55□□□□□ -0.72
CAPN1-225ENST00000533704 SLC25A45Q8N413 288 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 TSEN2Q8NCE0 465 aaKnown RBP10.55□□□□□ -0.72
CAPN1-225ENST00000533704 FAM174AQ8TBP5 190 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 MDM1Q8TC05 714 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 VOPP1Q96AW1 172 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 IQCDQ96DY2 449 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 KLF6Q99612 283 aaPredicted RBP10.55□□□□□ -0.72
CAPN1-225ENST00000533704 C1QTNF7Q9BXJ2 289 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 CPEB1Q9BZB8 566 aaKnown RBP10.55□□□□□ -0.72
CAPN1-225ENST00000533704 SUV39H2Q9H5I1 410 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 CCDC86Q9H6F5 360 aaKnown RBP10.55□□□□□ -0.72
CAPN1-225ENST00000533704 ATP13A3Q9H7F0 1226 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 DKK3Q9UBP4 350 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 IP6K2Q9UHH9 426 aa10.55□□□□□ -0.72
CAPN1-225ENST00000533704 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.55□□□□□ -0.72
CAPN1-225ENST00000533704 URB1O60287 2271 aaKnown RBP10.54□□□□□ -0.72
CAPN1-225ENST00000533704 FAM208BQ5VWN6 2430 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 TRABD2BA6NFA1 517 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 SRRM3A6NNA2 597 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-225ENST00000533704 H3BM21 787 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 LZTS3O60299 673 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-225ENST00000533704 BUB1BO60566 1050 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-225ENST00000533704 CYP1A2P05177 515 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 RARAP10276 462 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 ALPPL2P10696 532 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 MYF5P13349 255 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 JUNDP17535 347 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 CKMT2P17540 419 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 SERPINA4P29622 427 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 HNF1BP35680 557 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 IGFALSP35858 605 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 EIF4A3P38919 411 aaKnown RBP10.54□□□□□ -0.72
CAPN1-225ENST00000533704 HCAR3P49019 387 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 SCNN1BP51168 640 aa10.54□□□□□ -0.72
CAPN1-225ENST00000533704 ZNF135P52742 658 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms