RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 PPP1R3GB7ZBB8 358 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 RNF103O00237 685 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 NTN3O00634 580 aaPredicted RBP11.71□□□□□ -0.53
CMTM1-216ENST00000533078 EFSO43281 561 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 PPFIA2O75334 1257 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 ZMPSTE24O75844 475 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 RASGRP1O95267 797 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 RPLP0P05388 317 aaKnown RBP11.71□□□□□ -0.53
CMTM1-216ENST00000533078 IGFALSP35858 605 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 MAPKAPK2P49137 400 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 PEX5P50542 639 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 PDX1P52945 283 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 ELP6Q0PNE2 266 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 CFAP58Q5T655 872 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 TMEM164Q5U3C3 297 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 RWDD4Q6NW29 188 aaKnown RBP11.71□□□□□ -0.53
CMTM1-216ENST00000533078 ZNF574Q6ZN55 896 aaPredicted RBP11.71□□□□□ -0.53
CMTM1-216ENST00000533078 KYQ8NBH2 561 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 PCDH19Q8TAB3 1148 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 EXTL1Q92935 676 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 NT5C3BQ969T7 300 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 CENPTQ96BT3 561 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 KLHL32Q96NJ5 620 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 CMKLR1Q99788 373 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 EPAS1Q99814 870 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 EDEM3Q9BZQ6 932 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 FOXP3Q9BZS1 431 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 TCEAL2Q9H3H9 227 aaPredicted RBP11.71□□□□□ -0.53
CMTM1-216ENST00000533078 ACSL6Q9UKU0 697 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 GPR34Q9UPC5 381 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 ITM2BQ9Y287 266 aa11.71□□□□□ -0.53
CMTM1-216ENST00000533078 DOCK4Q8N1I0 1966 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 GTPBP10A4D1E9 387 aaKnown RBP11.7□□□□□ -0.54
CMTM1-216ENST00000533078 PMS2P1A4D2B8 440 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 BIN1O00499 593 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 NVLO15381 856 aaKnown RBP11.7□□□□□ -0.54
CMTM1-216ENST00000533078 ZW10O43264 779 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 MMP20O60882 483 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 RAMP2O60895 175 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 IGSF6O95976 241 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 KRT10P13645 584 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 SLC9A1P19634 815 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 CD82P27701 267 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 CCKBRP32239 447 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 SUOXP51687 545 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 HK3P52790 923 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 LRRC14Q15048 493 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 TPD52L1Q16890 204 aaPredicted RBP11.7□□□□□ -0.54
CMTM1-216ENST00000533078 KLHL40Q2TBA0 621 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 MYLK3Q32MK0 819 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 TPRG1LQ5T0D9 272 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 OTUD1Q5VV17 481 aaPredicted RBP11.7□□□□□ -0.54
CMTM1-216ENST00000533078 ENPP7Q6UWV6 458 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 GDPD4Q6W3E5 623 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 RD3Q7Z3Z2 195 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 SLC47A2Q86VL8 602 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 FAM131BQ86XD5 332 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 EXD3Q8N9H8 876 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 CASKIN2Q8WXE0 1202 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 ARHGEF2Q92974 986 aaKnown RBP11.7□□□□□ -0.54
CMTM1-216ENST00000533078 GDAP1L1Q96MZ0 367 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 NCAPGQ9BPX3 1015 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 CLPBQ9H078 707 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 MAGEH1Q9H213 219 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 LRRN3Q9H3W5 708 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 ANLNQ9NQW6 1124 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 STARD5Q9NSY2 213 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 GGT7Q9UJ14 662 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 LOXL2Q9Y4K0 774 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 PTPN13Q12923 2485 aa11.7□□□□□ -0.54
CMTM1-216ENST00000533078 UBR5O95071 2799 aaPredicted RBP11.69□□□□□ -0.54
CMTM1-216ENST00000533078 GOLGA8SH3BPF8 625 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 TNFP01375 233 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 TFE3P19532 575 aaPredicted RBP11.69□□□□□ -0.54
CMTM1-216ENST00000533078 GKP32189 559 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 MTIF2P46199 727 aaKnown RBP11.69□□□□□ -0.54
CMTM1-216ENST00000533078 GABRB2P47870 512 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 CCL7P80098 99 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 MORC3Q14149 939 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 ARHGEF7Q14155 803 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 ERAP2Q6P179 960 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 B3GNT8Q7Z7M8 397 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 CCNJLQ8IV13 435 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 TSACCQ96A04 125 aaPredicted RBP11.69□□□□□ -0.54
CMTM1-216ENST00000533078 SEMA3CQ99985 751 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 WRAP53Q9BUR4 548 aaKnown RBP11.69□□□□□ -0.54
CMTM1-216ENST00000533078 PLCB1Q9NQ66 1216 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 KLQ9UEF7 1012 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 OR12D3Q9UGF7 316 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 DNAI1Q9UI46 699 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 DNAJC12Q9UKB3 198 aa11.69□□□□□ -0.54
CMTM1-216ENST00000533078 COL27A1Q8IZC6 1860 aaPredicted RBP11.69□□□□□ -0.54
CMTM1-216ENST00000533078 TLN1Q9Y490 2541 aaKnown RBP11.68□□□□□ -0.54
CMTM1-216ENST00000533078 A0A1W2PQC6 194 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 I6L893 689 aaPredicted RBP11.68□□□□□ -0.54
CMTM1-216ENST00000533078 TERTO14746 1132 aaKnown RBP11.68□□□□□ -0.54
CMTM1-216ENST00000533078 AREL1O15033 823 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 BUB1O43683 1085 aa11.68□□□□□ -0.54
CMTM1-216ENST00000533078 LSM8O95777 96 aaKnown RBP11.68□□□□□ -0.54
CMTM1-216ENST00000533078 NTRK1P04629 796 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms