RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 ARHGEF2Q92974 986 aaKnown RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 DMRTA2Q96SC8 542 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 G6PC3Q9BUM1 346 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 TMEM168Q9H0V1 697 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 LHX5Q9H2C1 402 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 PCIF1Q9H4Z3 704 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 ATP13A1Q9HD20 1204 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 TSPAN16Q9UKR8 245 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 PCDHGC3Q9UN70 934 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 SLC8A2Q9UPR5 921 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 TP53TG5Q9Y2B4 290 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 IGLV3-12A0A075B6K2 115 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 A0A1W2PQU0 124 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 KLK10O43240 276 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 ACSL4O60488 711 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 TOXO94900 526 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 IL18RAPO95256 599 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 KRT7P08729 469 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 IL1R2P27930 398 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 ATP5C1P36542 298 aaKnown RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 PNPLA4P41247 253 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 NOP2P46087 812 aaKnown RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 GFERP55789 205 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 GABREP78334 506 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 NCOA4Q13772 614 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 AUHQ13825 339 aaKnown RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 PPP2R5AQ15172 486 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 IQCEQ6IPM2 695 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 ESRP1Q6NXG1 681 aaKnown RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 LIPIQ6XZB0 460 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 Q6ZPB1 254 aaPredicted RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 CENPQQ7L2Z9 268 aaPredicted RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 CCDC83Q8IWF9 413 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 UNC5BQ8IZJ1 945 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 CCAR2Q8N163 923 aaKnown RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 C3orf20Q8ND61 904 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 RHBDD1Q8TEB9 315 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 EDEM1Q92611 657 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 ISG20Q96AZ6 181 aaKnown RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 WDR37Q9Y2I8 494 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 GOLGA8CPA6NN73 597 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 B4E171 279 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 USP12O75317 370 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 LEFTY1O75610 366 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 LUC7L3O95232 432 aaKnown RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 CYP1A1P04798 512 aaPredicted RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 IGFBP1P08833 259 aaPredicted RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 ADRB3P13945 408 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 CD46P15529 392 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 C5AR1P21730 350 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 GNLYP22749 145 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 PEBP1P30086 187 aaKnown RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 LONP1P36776 959 aaKnown RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 GNL1P36915 607 aaPredicted RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 TSPAN7P41732 249 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 RPIAP49247 311 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 MAP3K7CLP57077 242 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 CXADRP78310 365 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 SH3BP2P78314 561 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 RBP5P82980 135 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 SLC10A2Q12908 348 aaPredicted RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 TRDNQ13061 729 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 DUOXA2Q1HG44 320 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 TMEM52BQ4KMG9 183 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 DENND5AQ6IQ26 1287 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 H3F3CQ6NXT2 135 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 ZCCHC8Q6NZY4 707 aaKnown RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 HORMAD1Q86X24 394 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 FAM71AQ8IYT1 594 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 UMODL1-AS1Q8N2C9 162 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 CPA6Q8N4T0 437 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 ZBTB2Q8N680 514 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 C12orf50Q8NA57 414 aaPredicted RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 DEPTORQ8TB45 409 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 GRIN3AQ8TCU5 1115 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 NANOS1Q8WY41 292 aaKnown RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 NRGNQ92686 78 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 SGF29Q96ES7 293 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 NUSAP1Q9BXS6 441 aaKnown RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 RAB33BQ9H082 229 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 GANQ9H2C0 597 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 ADNPQ9H2P0 1102 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 TNMDQ9H2S6 317 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 ZSCAN16Q9H4T2 348 aaPredicted RBP1.74□□□□□ -2.13
KNL1-211ENST00000533001 FBXL12Q9NXK8 326 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 MARCH2Q9P0N8 246 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 DKK3Q9UBP4 350 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 TBC1D29Q9UFV1 150 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 PCDHA5Q9Y5H7 936 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 KLK4Q9Y5K2 254 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 HS3ST3A1Q9Y663 406 aa1.74□□□□□ -2.13
KNL1-211ENST00000533001 IGLV3-16A0A075B6K0 115 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 ARHGEF35A5YM69 484 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 DFNA5O60443 496 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 AP1G2O75843 785 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 RTN3O95197 1032 aaPredicted RBP1.73□□□□□ -2.13
KNL1-211ENST00000533001 ERBB2P04626 1255 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 TPOP07202 933 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 SOX11P35716 441 aa1.73□□□□□ -2.13
KNL1-211ENST00000533001 ARPP19P56211 112 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms