RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 WRAP53Q9BUR4 548 aaKnown RBP18.03■□□□□ 0.48
SMG1-203ENST00000532700 MBNL1Q9NR56 388 aaKnown RBP18.03■□□□□ 0.48
SMG1-203ENST00000532700 UBA2Q9UBT2 640 aaPredicted RBP18.03■□□□□ 0.48
SMG1-203ENST00000532700 COQ6Q9Y2Z9 468 aa18.03■□□□□ 0.48
SMG1-203ENST00000532700 LY6G6EA0A0G2JKS1 128 aa18.02■□□□□ 0.48
SMG1-203ENST00000532700 ZSCAN5CA6NGD5 496 aaPredicted RBP18.02■□□□□ 0.48
SMG1-203ENST00000532700 A6NNZ2 444 aa18.02■□□□□ 0.48
SMG1-203ENST00000532700 FFAR2O15552 330 aa18.02■□□□□ 0.48
SMG1-203ENST00000532700 CBFA2T2O43439 604 aa18.02■□□□□ 0.48
SMG1-203ENST00000532700 SIGLEC6O43699 453 aa18.02■□□□□ 0.48
SMG1-203ENST00000532700 PIAS2O75928 621 aa18.02■□□□□ 0.48
SMG1-203ENST00000532700 NEBLO76041 1014 aa18.02■□□□□ 0.48
SMG1-203ENST00000532700 IGSF6O95976 241 aa18.02■□□□□ 0.48
SMG1-203ENST00000532700 INO80DQ53TQ3 878 aaPredicted RBP18.02■□□□□ 0.48
SMG1-203ENST00000532700 KYAT3Q6YP21 454 aaKnown RBP18.02■□□□□ 0.48
SMG1-203ENST00000532700 TSEN2Q8NCE0 465 aaKnown RBP18.02■□□□□ 0.48
SMG1-203ENST00000532700 RNF214Q8ND24 703 aa18.02■□□□□ 0.48
SMG1-203ENST00000532700 FUBP1Q96AE4 644 aaKnown RBP18.02■□□□□ 0.48
SMG1-203ENST00000532700 LRIG1Q96JA1 1093 aa18.02■□□□□ 0.48
SMG1-203ENST00000532700 FEM1CQ96JP0 617 aa18.02■□□□□ 0.48
SMG1-203ENST00000532700 TCEAL2Q9H3H9 227 aaPredicted RBP18.02■□□□□ 0.48
SMG1-203ENST00000532700 KLHL11Q9NVR0 708 aa18.02■□□□□ 0.48
SMG1-203ENST00000532700 CAPN11Q9UMQ6 739 aa18.02■□□□□ 0.48
SMG1-203ENST00000532700 U3KQA8 63 aa18.02■□□□□ 0.48
SMG1-203ENST00000532700 TMEM8BA6NDV4 472 aa18.01■□□□□ 0.47
SMG1-203ENST00000532700 DFFAO00273 331 aa18.01■□□□□ 0.47
SMG1-203ENST00000532700 YKT6O15498 198 aa18.01■□□□□ 0.47
SMG1-203ENST00000532700 PRPSAP2O60256 369 aa18.01■□□□□ 0.47
SMG1-203ENST00000532700 CASP14P31944 242 aa18.01■□□□□ 0.47
SMG1-203ENST00000532700 NDST2P52849 883 aa18.01■□□□□ 0.47
SMG1-203ENST00000532700 EIF2B5Q13144 721 aaKnown RBP18.01■□□□□ 0.47
SMG1-203ENST00000532700 INAVAQ3KP66 663 aa18.01■□□□□ 0.47
SMG1-203ENST00000532700 KCTD16Q68DU8 428 aa18.01■□□□□ 0.47
SMG1-203ENST00000532700 CAMK1DQ8IU85 385 aa18.01■□□□□ 0.47
SMG1-203ENST00000532700 OXR1Q8N573 874 aa18.01■□□□□ 0.47
SMG1-203ENST00000532700 CENPTQ96BT3 561 aa18.01■□□□□ 0.47
SMG1-203ENST00000532700 IQCDQ96DY2 449 aa18.01■□□□□ 0.47
SMG1-203ENST00000532700 ANP32EQ9BTT0 268 aa18.01■□□□□ 0.47
SMG1-203ENST00000532700 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.01■□□□□ 0.47
SMG1-203ENST00000532700 XPO4Q9C0E2 1151 aaKnown RBP18.01■□□□□ 0.47
SMG1-203ENST00000532700 ZWILCHQ9H900 591 aa18.01■□□□□ 0.47
SMG1-203ENST00000532700 CELSR3Q9NYQ7 3312 aa18■□□□□ 0.47
SMG1-203ENST00000532700 TSPAN11A1L157 253 aa18■□□□□ 0.47
SMG1-203ENST00000532700 CASC3O15234 703 aaKnown RBP18■□□□□ 0.47
SMG1-203ENST00000532700 TSPAN6O43657 245 aa18■□□□□ 0.47
SMG1-203ENST00000532700 RFPL3O75679 317 aa18■□□□□ 0.47
SMG1-203ENST00000532700 RARAP10276 462 aa18■□□□□ 0.47
SMG1-203ENST00000532700 AMPD1P23109 780 aa18■□□□□ 0.47
SMG1-203ENST00000532700 PFN3P60673 137 aa18■□□□□ 0.47
SMG1-203ENST00000532700 ZBED6P86452 979 aa18■□□□□ 0.47
SMG1-203ENST00000532700 SLC25A11Q02978 314 aaKnown RBP18■□□□□ 0.47
SMG1-203ENST00000532700 CCDC15Q0P6D6 951 aa18■□□□□ 0.47
SMG1-203ENST00000532700 PPP1R2P3Q6NXS1 205 aa18■□□□□ 0.47
SMG1-203ENST00000532700 TTC7BQ86TV6 843 aa18■□□□□ 0.47
SMG1-203ENST00000532700 VPS36Q86VN1 386 aa18■□□□□ 0.47
SMG1-203ENST00000532700 PROSER1Q86XN7 944 aa18■□□□□ 0.47
SMG1-203ENST00000532700 RBFAQ8N0V3 343 aa18■□□□□ 0.47
SMG1-203ENST00000532700 TP53I13Q8NBR0 393 aaPredicted RBP18■□□□□ 0.47
SMG1-203ENST00000532700 CASKIN2Q8WXE0 1202 aa18■□□□□ 0.47
SMG1-203ENST00000532700 HSPH1Q92598 858 aa18■□□□□ 0.47
SMG1-203ENST00000532700 OSBPL1AQ9BXW6 950 aa18■□□□□ 0.47
SMG1-203ENST00000532700 PACSIN1Q9BY11 444 aa18■□□□□ 0.47
SMG1-203ENST00000532700 DNAJC28Q9NX36 388 aa18■□□□□ 0.47
SMG1-203ENST00000532700 HS3ST3A1Q9Y663 406 aa18■□□□□ 0.47
SMG1-203ENST00000532700 SCINQ9Y6U3 715 aa18■□□□□ 0.47
SMG1-203ENST00000532700 SPTY2D1-AS1A0A0U1RR47 76 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 NEMP1O14524 444 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 RNF8O76064 485 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 PEX11BO96011 259 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 SERPING1P05155 500 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 CD48P09326 243 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 HTR7P34969 479 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 PDE1CQ14123 709 aaPredicted RBP17.99■□□□□ 0.47
SMG1-203ENST00000532700 DPYSL2Q16555 572 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 POLNQ7Z5Q5 900 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 PGBD5Q8N414 524 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 OR4C6Q8NH72 309 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 SYN2Q92777 582 aaPredicted RBP17.99■□□□□ 0.47
SMG1-203ENST00000532700 RAB7BQ96AH8 199 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 LENG8Q96PV6 779 aaPredicted RBP17.99■□□□□ 0.47
SMG1-203ENST00000532700 NUP85Q9BW27 656 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 CPEB1Q9BZB8 566 aaKnown RBP17.99■□□□□ 0.47
SMG1-203ENST00000532700 PCDH12Q9NPG4 1184 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.99■□□□□ 0.47
SMG1-203ENST00000532700 DKK3Q9UBP4 350 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 PKD1L2Q7Z442 2459 aa17.99■□□□□ 0.47
SMG1-203ENST00000532700 TRABD2BA6NFA1 517 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 ARHGAP42A6NI28 874 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 DAPK3O43293 454 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 MAGEC1O60732 1142 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 CYP1A2P05177 515 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 CELA2BP08218 269 aaPredicted RBP17.98■□□□□ 0.47
SMG1-203ENST00000532700 MYBL1P10243 752 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 GM2AP17900 193 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 PCK1P35558 622 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 SLC10A7Q0GE19 358 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 RALGDSQ12967 914 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 MMRN1Q13201 1228 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 PTPRRQ15256 657 aa17.98■□□□□ 0.47
SMG1-203ENST00000532700 IRF4Q15306 451 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms