RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CD3EAPO15446 510 aaKnown RBP14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 ACSL4O60488 711 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 PAGE1O75459 146 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 LDLRP01130 860 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 MBTD1Q05BQ5 628 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 PPIGQ13427 754 aaKnown RBP eCLIP14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 FGD3Q5JSP0 725 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 POLNQ7Z5Q5 900 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 CREG2Q8IUH2 290 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 MARK4Q96L34 752 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 KLQ9UEF7 1012 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 ADAMTS3O15072 1205 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 SPDYCQ5MJ68 293 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 SEZ6LQ9BYH1 1024 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 RERGLQ9H628 205 aa14.9□□□□□ -0.02
PCDHA9-202ENST00000532602 A0A0B4J269 797 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 ALADP13716 330 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 LBPP18428 481 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 NEK3P51956 506 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 SAMD4BQ5PRF9 694 aaKnown RBP14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 ADAMTSL2Q86TH1 951 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 CPA6Q8N4T0 437 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 FBXO22Q8NEZ5 403 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 SHC3Q92529 594 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 BAP1Q92560 729 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 NACC2Q96BF6 587 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 TIFAQ96CG3 184 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 KREMEN1Q96MU8 473 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 APOL4Q9BPW4 351 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 NOD2Q9HC29 1040 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 LIMD1Q9UGP4 676 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 AGO1Q9UL18 857 aaKnown RBP14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 H3BQF6 201 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 PAPSS1O43252 624 aaPredicted RBP14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 AVILO75366 819 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 MLYCDO95822 493 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 TSHRP16473 764 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 LPOP22079 712 aaPredicted RBP14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 IL5RAQ01344 420 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 CEP78Q5JTW2 689 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 NEK10Q6ZWH5 1172 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 MOSPD2Q8NHP6 518 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 ZNF384Q8TF68 577 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 ARNTL2Q8WYA1 636 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 ROGDIQ9GZN7 287 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 RBPJLQ9UBG7 517 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 CYP4X1Q8N118 509 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 EPB41L4BQ9H329 900 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 RABGEF1Q9UJ41 708 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 PCDHA2Q9Y5H9 948 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 SYN1P17600 705 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 TSPAN8P19075 237 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 ADRA1DP25100 572 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 NUP62P37198 522 aaPredicted RBP14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 FEN1P39748 380 aaKnown RBP14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 C21orf59P57076 290 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 COMMD2Q86X83 199 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 EPHX4Q8IUS5 362 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 SEPHS2Q99611 448 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 RXFP1Q9HBX9 757 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 H3BN98 237 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 FGF1P05230 155 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 SEC13P55735 322 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 RGS1Q08116 209 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 TOMM20Q15388 145 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 ATAT1Q5SQI0 421 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 HYIQ5T013 277 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 CDC73Q6P1J9 531 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 DNAJC14Q6Y2X3 702 aaPredicted RBP14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 ATXN2LQ8WWM7 1075 aaKnown RBP14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 C19orf60Q96EN9 201 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 FCRL2Q96LA5 508 aaPredicted RBP14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 SPATA5L1Q9BVQ7 753 aa14.89□□□□□ -0.03
PCDHA9-202ENST00000532602 ARL2P36404 184 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 RFWD3Q6PCD5 774 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 PHC3Q8NDX5 983 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 CENPTQ96BT3 561 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 B3GALT6Q96L58 329 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 PRDM12Q9H4Q4 367 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 KLHL3Q9UH77 587 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 ZNF142P52746 1687 aaPredicted RBP14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 ABCC6O95255 1503 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 SHBGP04278 402 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 APODP05090 189 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 CCND3P30281 292 aaPredicted RBP14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 MAGEA10P43363 369 aaPredicted RBP14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 RPL14P50914 215 aaKnown RBP14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 PFKFB4Q16877 469 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 ZDHHC20Q5W0Z9 365 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 PRSS55Q6UWB4 352 aaPredicted RBP14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 FAM20CQ8IXL6 584 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 SVOPQ8N4V2 548 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 BRI3BPQ8WY22 251 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 PCDHB18PQ96TA0 734 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 KLHL4Q9C0H6 718 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 DEC1Q9P2X7 70 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 NFKBIL1Q9UBC1 381 aaPredicted RBP14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 CLDN11O75508 207 aa14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 SMNDC1O75940 238 aaKnown RBP eCLIP14.88□□□□□ -0.03
PCDHA9-202ENST00000532602 SNUPNO95149 360 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms