RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 LENG8Q96PV6 779 aaPredicted RBP17.44■□□□□ 0.38
PHRF1-204ENST00000532550 SUV39H2Q9H5I1 410 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 TOR4AQ9NXH8 423 aa17.44■□□□□ 0.38
PHRF1-204ENST00000532550 IPO11Q9UI26 975 aaKnown RBP17.44■□□□□ 0.38
PHRF1-204ENST00000532550 ARID1BQ8NFD5 2236 aaPredicted RBP17.44■□□□□ 0.38
PHRF1-204ENST00000532550 AREL1O15033 823 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 TCF4P15884 667 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 AMPD1P23109 780 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 CSNK1DP48730 415 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 SUOXP51687 545 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 IL10RBQ08334 325 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 DPYSQ14117 519 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 RFTN1Q14699 578 aaPredicted RBP17.43■□□□□ 0.38
PHRF1-204ENST00000532550 HADHQ16836 314 aaKnown RBP17.43■□□□□ 0.38
PHRF1-204ENST00000532550 CFAP58Q5T655 872 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 TMCO3Q6UWJ1 677 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 PTAR1Q7Z6K3 402 aaPredicted RBP17.43■□□□□ 0.38
PHRF1-204ENST00000532550 SRLQ86TD4 932 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 ARHGAP12Q8IWW6 846 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 CXorf40AQ8TE69 158 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 TEKT4Q8WW24 435 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 GATA6Q92908 595 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 ZNF641Q96N77 438 aaPredicted RBP17.43■□□□□ 0.38
PHRF1-204ENST00000532550 CINPQ9BW66 212 aaPredicted RBP17.43■□□□□ 0.38
PHRF1-204ENST00000532550 DEF6Q9H4E7 631 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.43■□□□□ 0.38
PHRF1-204ENST00000532550 CTTNBP2NLQ9P2B4 639 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 GGT7Q9UJ14 662 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 ITM2BQ9Y287 266 aa17.43■□□□□ 0.38
PHRF1-204ENST00000532550 POM121BA6NF01 834 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 ENC1O14682 589 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 RAD51BO15315 384 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 MMP20O60882 483 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 SDC3O75056 442 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 TM7SF2O76062 418 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 DKK1O94907 266 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 PIGNO95427 931 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 H2AFZP0C0S5 128 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 RABIFP47224 123 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 RENBPP51606 427 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 NSUN2Q08J23 767 aaKnown RBP eCLIP17.42■□□□□ 0.38
PHRF1-204ENST00000532550 ELP6Q0PNE2 266 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 KRT81Q14533 505 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 SLC18A3Q16572 532 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 HS1BP3Q53T59 392 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 LRRC73Q5JTD7 316 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 ARHGAP36Q6ZRI8 547 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 H2AFVQ71UI9 128 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 NPWQ8N729 165 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 TSEN2Q8NCE0 465 aaKnown RBP17.42■□□□□ 0.38
PHRF1-204ENST00000532550 RNF214Q8ND24 703 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 ZNF564Q8TBZ8 553 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-204ENST00000532550 CTNNBL1Q8WYA6 563 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-204ENST00000532550 IFT43Q96FT9 208 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 TUBGCP5Q96RT8 1024 aa17.42■□□□□ 0.38
PHRF1-204ENST00000532550 TMEM8BA6NDV4 472 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 BUB1BO60566 1050 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-204ENST00000532550 ITIH2P19823 946 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 UGP2Q16851 508 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 TXNRD3NBQ6F5E7 133 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 ERAP2Q6P179 960 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 KYAT3Q6YP21 454 aaKnown RBP17.41■□□□□ 0.38
PHRF1-204ENST00000532550 TMPRSS7Q7RTY8 843 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 CAMK1DQ8IU85 385 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 VSTM4Q8IW00 320 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 SLC22A18ASQ8N1D0 253 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 PAF1Q8N7H5 531 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 DENND6BQ8NEG7 585 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 ZNF599Q96NL3 588 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 CSPG4P5Q96PW8 444 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 KLF6Q99612 283 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-204ENST00000532550 DNAJC7Q99615 494 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 C1QTNF7Q9BXJ2 289 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 TMEM121BQ9BXQ6 578 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-204ENST00000532550 ATP13A3Q9H7F0 1226 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 PCDH18Q9HCL0 1135 aa17.41■□□□□ 0.38
PHRF1-204ENST00000532550 SPINT1O43278 529 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 AKR1B10O60218 316 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 C1SP09871 688 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 CDK4P11802 303 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 DGKAP23743 735 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 SERPINA4P29622 427 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 SERPINB6P35237 376 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 CDH6P55285 790 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 SLC25A11Q02978 314 aaKnown RBP17.4■□□□□ 0.38
PHRF1-204ENST00000532550 BCL2L1Q07817 233 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 DNAJC3Q13217 504 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 LBRQ14739 615 aaKnown RBP17.4■□□□□ 0.38
PHRF1-204ENST00000532550 TMEM52BQ4KMG9 183 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 BRAT1Q6PJG6 821 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 CCNI2Q6ZMN8 369 aaPredicted RBP17.4■□□□□ 0.38
PHRF1-204ENST00000532550 KANSL1Q7Z3B3 1105 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 TP53INP2Q8IXH6 220 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 GALNT15Q8N3T1 639 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 SLC25A45Q8N413 288 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 KDF1Q8NAX2 398 aaPredicted RBP17.4■□□□□ 0.38
PHRF1-204ENST00000532550 NSMCE1Q8WV22 266 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 CENPTQ96BT3 561 aa17.4■□□□□ 0.38
PHRF1-204ENST00000532550 WRAP53Q9BUR4 548 aaKnown RBP17.4■□□□□ 0.38
PHRF1-204ENST00000532550 ETNK2Q9NVF9 386 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms