RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 LBRQ14739 615 aaKnown RBP23.24■■□□□ 1.31
CAPN1-222ENST00000532285 TRIP6Q15654 476 aaKnown RBP23.24■■□□□ 1.31
CAPN1-222ENST00000532285 TMCO4Q5TGY1 634 aa23.24■■□□□ 1.31
CAPN1-222ENST00000532285 LRRC49Q8IUZ0 686 aa23.24■■□□□ 1.31
CAPN1-222ENST00000532285 OXR1Q8N573 874 aa23.24■■□□□ 1.31
CAPN1-222ENST00000532285 FAM174AQ8TBP5 190 aa23.24■■□□□ 1.31
CAPN1-222ENST00000532285 MYOCQ99972 504 aa23.24■■□□□ 1.31
CAPN1-222ENST00000532285 SEPT3Q9UH03 358 aa23.24■■□□□ 1.31
CAPN1-222ENST00000532285 PCOLCE2Q9UKZ9 415 aa23.24■■□□□ 1.31
CAPN1-222ENST00000532285 CA5BQ9Y2D0 317 aa23.24■■□□□ 1.31
CAPN1-222ENST00000532285 LRRK1Q38SD2 2015 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 SPAARA0A1B0GVQ0 90 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 YKT6O15498 198 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 CBFA2T3O75081 653 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 PIGNO95427 931 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 TIMP2P16035 220 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 PMLP29590 882 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 RGRP47804 291 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 ARRB1P49407 418 aaPredicted RBP23.23■■□□□ 1.31
CAPN1-222ENST00000532285 SIM1P81133 766 aaPredicted RBP23.23■■□□□ 1.31
CAPN1-222ENST00000532285 SGCGQ13326 291 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 TCEAL1Q15170 157 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 GAS2L3Q86XJ1 694 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 CCDC170Q8IYT3 715 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 ATPAF2Q8N5M1 289 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 RHBDD1Q8TEB9 315 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 PSKH2Q96QS6 385 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 ZNF670Q9BS34 389 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 C1QTNF2Q9BXJ5 285 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 ATP13A3Q9H7F0 1226 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 FZD3Q9NPG1 666 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 HS3ST3A1Q9Y663 406 aa23.23■■□□□ 1.31
CAPN1-222ENST00000532285 TSPAN11A1L157 253 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 IGLON5A6NGN9 336 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 SPINT1O43278 529 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 BUB1BO60566 1050 aaPredicted RBP23.22■■□□□ 1.31
CAPN1-222ENST00000532285 MAFKO60675 156 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 PAK4O96013 591 aaPredicted RBP23.22■■□□□ 1.31
CAPN1-222ENST00000532285 XPAP23025 273 aaPredicted RBP23.22■■□□□ 1.31
CAPN1-222ENST00000532285 SERPINA4P29622 427 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 FAM193AP78312 1265 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 SLC10A7Q0GE19 358 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 FGL2Q14314 439 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 ANKRD20A8PQ5CZ79 823 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 PRAMEF14Q5SWL7 426 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 ZFYVE27Q5T4F4 411 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 CFAP58Q5T655 872 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 BRAT1Q6PJG6 821 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 SPATS2Q86XZ4 545 aaKnown RBP23.22■■□□□ 1.31
CAPN1-222ENST00000532285 NSMCE1Q8WV22 266 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 ASB12Q8WXK4 309 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 LENG8Q96PV6 779 aaPredicted RBP23.22■■□□□ 1.31
CAPN1-222ENST00000532285 GGT7Q9UJ14 662 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 ITM2BQ9Y287 266 aa23.22■■□□□ 1.31
CAPN1-222ENST00000532285 THEGLP0DJG4 465 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 HSPA9P38646 679 aaKnown RBP23.21■■□□□ 1.31
CAPN1-222ENST00000532285 GRK6P43250 576 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 MAGEA1P43355 309 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 RXRGP48443 463 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 IL9RQ01113 521 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 ELP6Q0PNE2 266 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 ZNF235Q14590 738 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 PAFAH1B3Q15102 231 aaKnown RBP23.21■■□□□ 1.31
CAPN1-222ENST00000532285 INAVAQ3KP66 663 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 LRRC73Q5JTD7 316 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 ABI3BPQ7Z7G0 1075 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 CAMK1DQ8IU85 385 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 BBS5Q8N3I7 341 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 PCDH19Q8TAB3 1148 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 CXorf40AQ8TE69 158 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 PANX2Q96RD6 677 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 CDC6Q99741 560 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 ANP32EQ9BTT0 268 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 KLHL11Q9NVR0 708 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 ANGPTL2Q9UKU9 493 aa23.21■■□□□ 1.31
CAPN1-222ENST00000532285 TDRD6O60522 2096 aaKnown RBP23.2■■□□□ 1.3
CAPN1-222ENST00000532285 A6NNZ2 444 aa23.2■■□□□ 1.3
CAPN1-222ENST00000532285 LCA5LO95447 670 aa23.2■■□□□ 1.3
CAPN1-222ENST00000532285 PEX11BO96011 259 aa23.2■■□□□ 1.3
CAPN1-222ENST00000532285 KDELR1P24390 212 aa23.2■■□□□ 1.3
CAPN1-222ENST00000532285 SCNN1BP51168 640 aa23.2■■□□□ 1.3
CAPN1-222ENST00000532285 AP1S1P61966 158 aa23.2■■□□□ 1.3
CAPN1-222ENST00000532285 SHC2P98077 582 aa23.2■■□□□ 1.3
CAPN1-222ENST00000532285 BCL2L1Q07817 233 aa23.2■■□□□ 1.3
CAPN1-222ENST00000532285 SHBQ15464 509 aa23.2■■□□□ 1.3
CAPN1-222ENST00000532285 UGP2Q16851 508 aa23.2■■□□□ 1.3
CAPN1-222ENST00000532285 NCBP2-AS2Q69YL0 99 aa23.2■■□□□ 1.3
CAPN1-222ENST00000532285 GCNT7Q6ZNI0 430 aa23.2■■□□□ 1.3
CAPN1-222ENST00000532285 GLRX5Q86SX6 157 aa23.2■■□□□ 1.3
CAPN1-222ENST00000532285 BAHD1Q8TBE0 780 aaPredicted RBP23.2■■□□□ 1.3
CAPN1-222ENST00000532285 FAF2Q96CS3 445 aa23.2■■□□□ 1.3
CAPN1-222ENST00000532285 BTBD3Q9Y2F9 522 aa23.2■■□□□ 1.3
CAPN1-222ENST00000532285 MUSKO15146 869 aa23.19■■□□□ 1.3
CAPN1-222ENST00000532285 CYLC1P35663 651 aaPredicted RBP23.19■■□□□ 1.3
CAPN1-222ENST00000532285 SLC1A1P43005 524 aa23.19■■□□□ 1.3
CAPN1-222ENST00000532285 CLDN2P57739 230 aa23.19■■□□□ 1.3
CAPN1-222ENST00000532285 SPA17Q15506 151 aa23.19■■□□□ 1.3
CAPN1-222ENST00000532285 TMEM52BQ4KMG9 183 aa23.19■■□□□ 1.3
CAPN1-222ENST00000532285 MARC1Q5VT66 337 aa23.19■■□□□ 1.3
CAPN1-222ENST00000532285 DCP2Q8IU60 420 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms