RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 UNC5AQ6ZN44 842 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 SH3BP5LQ7L8J4 393 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 EXOC3L1Q86VI1 746 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 ULK2Q8IYT8 1036 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 LRRC52Q8N7C0 313 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 OR4A15Q8NGL6 344 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 CLN6Q9NWW5 311 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 GGA2Q9UJY4 613 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 H0YC42 278 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 TRIM38O00635 465 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 IRF6O14896 467 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 PRMT3O60678 531 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 OTCP00480 354 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 HDCP19113 662 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 EPORP19235 508 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 CD52P31358 61 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 GSSP48637 474 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 ELF3P78545 371 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-227ENST00000530748 IRF8Q02556 426 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 BNIP2Q12982 314 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 GPAT3Q53EU6 434 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 TREML2Q5T2D2 321 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 FAM46CQ5VWP2 391 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 GPRIN3Q6ZVF9 776 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 ANKRD23Q86SG2 305 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 PIGZQ86VD9 579 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 ZC3H7AQ8IWR0 971 aaKnown RBP8.54□□□□□ -1.04
CTNND1-227ENST00000530748 DSELQ8IZU8 1212 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 FBXO30Q8TB52 745 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 MAF1Q9H063 256 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 SPAG4Q9NPE6 437 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.54□□□□□ -1.043e-6■□□□□ 9.8
CTNND1-227ENST00000530748 BCL9LQ86UU0 1499 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 FAM237BA0A1B0GVD1 139 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 ASNA1O43681 348 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 AMD1P17707 334 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 FGFR3P22607 806 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 POLD2P49005 469 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 COPZ1P61923 177 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 FKBP1BP68106 108 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 SP3Q02447 781 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 SMARCB1Q12824 385 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 GRIK5Q16478 980 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 GJC2Q5T442 439 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-227ENST00000530748 PPP1R26Q5T8A7 1209 aaPredicted RBP8.54□□□□□ -1.04
CTNND1-227ENST00000530748 ANXA8L1Q5VT79 327 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 FAM35AQ86V20 835 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 FAM20CQ8IXL6 584 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 MREGQ8N565 214 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 OR4L1Q8NH43 312 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 REXO4Q9GZR2 422 aaKnown RBP8.54□□□□□ -1.04
CTNND1-227ENST00000530748 LHX5Q9H2C1 402 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 DNAJC5Q9H3Z4 198 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 AGO1Q9UL18 857 aaKnown RBP8.54□□□□□ -1.04
CTNND1-227ENST00000530748 TBC1D30Q9Y2I9 924 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 LRCH1Q9Y2L9 728 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 IFT172Q9UG01 1749 aa8.54□□□□□ -1.04
CTNND1-227ENST00000530748 MYO5BQ9ULV0 1848 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 CLDN5O00501 218 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 GRM6O15303 877 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 SH3BGRLO75368 114 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 FARP2O94887 1054 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-227ENST00000530748 HLA-DQA2P01906 255 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 FLT3P36888 993 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 PKNOX1P55347 436 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 ATP6V0D1P61421 351 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 BHLHB9Q6PI77 547 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 CACUL1Q86Y37 369 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 SCAIQ8N9R8 606 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 RP9Q8TA86 221 aaKnown RBP8.53□□□□□ -1.04
CTNND1-227ENST00000530748 HEXDCQ8WVB3 486 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 KCTD4Q8WVF5 259 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 PRCCQ92733 491 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-227ENST00000530748 SLC47A1Q96FL8 570 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 MYO19Q96H55 970 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 ITCHQ96J02 903 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 Q96MT0 163 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 FHDC1Q9C0D6 1143 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-227ENST00000530748 CDH19Q9H159 772 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 KIAA1522Q9P206 1035 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-227ENST00000530748 SLC12A4Q9UP95 1085 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 SLC27A5Q9Y2P5 690 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 RAP2CQ9Y3L5 183 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 CNTNAP1P78357 1384 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 PIPSLA2A3N6 862 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 ADH1CP00326 375 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 SPATA31C1P0DKV0 1188 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 CDC25CP30307 473 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 CCR4P51679 360 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 AUHQ13825 339 aaKnown RBP8.53□□□□□ -1.04
CTNND1-227ENST00000530748 PMF1Q6P1K2 205 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 KIAA1324Q6UXG2 1013 aaKnown RBP8.53□□□□□ -1.04
CTNND1-227ENST00000530748 MARK2Q7KZI7 788 aaKnown RBP8.53□□□□□ -1.04
CTNND1-227ENST00000530748 R3HCC1LQ7Z5L2 792 aaKnown RBP8.53□□□□□ -1.04
CTNND1-227ENST00000530748 CERS5Q8N5B7 392 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 ZNF398Q8TD17 642 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 CD101Q93033 1021 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 ZBTB10Q96DT7 871 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 HES2Q9Y543 173 aa8.53□□□□□ -1.04
CTNND1-227ENST00000530748 AFDNP55196 1824 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms