RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 B3GALT6Q96L58 329 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 CAMK1GQ96NX5 476 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 MOGAT1Q96PD6 335 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 MAP7D2Q96T17 732 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 CLSTN3Q9BQT9 956 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 LRRCC1Q9C099 1032 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 NECTIN3Q9NQS3 549 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 RGL1Q9NZL6 768 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 PPP4R1LQ9P1A2 415 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 GRHPRQ9UBQ7 328 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 GPR52Q9Y2T5 361 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 FBN3Q75N90 2809 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 THADAQ6YHU6 1953 aa7.33□□□□□ -1.24
SVIP-204ENST00000530199 AHCTF1Q8WYP5 2266 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 USP9YO00507 2555 aaPredicted RBP7.32□□□□□ -1.24
SVIP-204ENST00000530199 NCANO14594 1321 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 TNRC6BQ9UPQ9 1833 aaKnown RBP7.32□□□□□ -1.24
SVIP-204ENST00000530199 PCDH15Q96QU1 1955 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 LOC102723971A0A1B0GUV8 181 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 RAB27BO00194 218 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 ZNF197O14709 1029 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 CBFA2T3O75081 653 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 PTPN2P17706 415 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 FGFR4P22455 802 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 TMOD1P28289 359 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 ADSSP30520 456 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 PI4KAP42356 2102 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 DHPSP49366 369 aaPredicted RBP7.32□□□□□ -1.24
SVIP-204ENST00000530199 NT5C2P49902 561 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 COPAP53621 1224 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 PIGFQ07326 219 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 SPARCL1Q14515 664 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 IQCB1Q15051 598 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 PLA1AQ53H76 456 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 TMEM196Q5HYL7 178 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 SPDYCQ5MJ68 293 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 FAM102AQ5T9C2 384 aaPredicted RBP7.32□□□□□ -1.24
SVIP-204ENST00000530199 C1QL3Q5VWW1 255 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 SYT13Q7L8C5 426 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 MINDY1Q8N5J2 469 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 METTL13Q8N6R0 699 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 TRIM63Q969Q1 353 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 TBC1D20Q96BZ9 403 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 MED8Q96G25 268 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 SLC46A1Q96NT5 459 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 TRIB1Q96RU8 372 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 PPP1R9BQ96SB3 815 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 SEC62Q99442 399 aaKnown RBP7.32□□□□□ -1.24
SVIP-204ENST00000530199 NEU1Q99519 415 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 SMOQ99835 787 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 TMEM120AQ9BXJ8 343 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 REXO4Q9GZR2 422 aaKnown RBP7.32□□□□□ -1.24
SVIP-204ENST00000530199 MAGEH1Q9H213 219 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 CASS4Q9NQ75 786 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 HEYLQ9NQ87 328 aaPredicted RBP7.32□□□□□ -1.24
SVIP-204ENST00000530199 TMEM74BQ9NUR3 256 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 CAPN11Q9UMQ6 739 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 GTF2A1LQ9UNN4 478 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 ZFR2Q9UPR6 939 aaKnown RBP7.32□□□□□ -1.24
SVIP-204ENST00000530199 TNNQ9UQP3 1299 aa7.32□□□□□ -1.24
SVIP-204ENST00000530199 ZFHX3Q15911 3703 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 NPEPPSL1A6NEC2 478 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 HEPACAM2A8MVW5 462 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 F8W810 466 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 SYT5O00445 386 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 ACKR2O00590 384 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 CCP110O43303 1012 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 PAX4O43316 350 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 TLX3O43711 291 aaPredicted RBP7.31□□□□□ -1.24
SVIP-204ENST00000530199 SERPINF2P08697 491 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 HSD3B1P14060 373 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 BCKDHBP21953 392 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 CLCN3P51790 818 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 GFPT1Q06210 699 aaPredicted RBP7.31□□□□□ -1.24
SVIP-204ENST00000530199 ZNF844Q08AG5 666 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 FOXO1Q12778 655 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 ARHGEF7Q14155 803 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 PTK2BQ14289 1009 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 ALX1Q15699 326 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 NPY5RQ15761 445 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 DUOXA1Q1HG43 343 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 AGAP9Q5VTM2 703 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 FCRL6Q6DN72 434 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 PRSS55Q6UWB4 352 aaPredicted RBP7.31□□□□□ -1.24
SVIP-204ENST00000530199 NAXDQ8IW45 347 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 RHOT2Q8IXI1 618 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 CEP76Q8TAP6 659 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 LNX1Q8TBB1 728 aaPredicted RBP7.31□□□□□ -1.24
SVIP-204ENST00000530199 IPO4Q8TEX9 1081 aaKnown RBP7.31□□□□□ -1.24
SVIP-204ENST00000530199 PNKPQ96T60 521 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 TTYH3Q9C0H2 523 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 FZD8Q9H461 694 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 UBN1Q9NPG3 1134 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 VSX1Q9NZR4 365 aaPredicted RBP7.31□□□□□ -1.24
SVIP-204ENST00000530199 LRFN1Q9P244 771 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 PILRBQ9UKJ0 227 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 PCDHB2Q9Y5E7 798 aa7.31□□□□□ -1.24
SVIP-204ENST00000530199 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 ARHGEF37A1IGU5 675 aa7.3□□□□□ -1.24
SVIP-204ENST00000530199 AQP12BA6NM10 295 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms