RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 AHCTF1Q8WYP5 2266 aa11.72□□□□□ -0.53
CMTM1-211ENST00000528484 ZSCAN5CA6NGD5 496 aaPredicted RBP11.71□□□□□ -0.53
CMTM1-211ENST00000528484 BECN2A8MW95 431 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 PPP1R3GB7ZBB8 358 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 RNF103O00237 685 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 NTN3O00634 580 aaPredicted RBP11.71□□□□□ -0.53
CMTM1-211ENST00000528484 EFSO43281 561 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 PPFIA2O75334 1257 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 ZMPSTE24O75844 475 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 RASGRP1O95267 797 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 RPLP0P05388 317 aaKnown RBP11.71□□□□□ -0.53
CMTM1-211ENST00000528484 IGFALSP35858 605 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 MAPKAPK2P49137 400 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 PEX5P50542 639 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 PDX1P52945 283 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 ELP6Q0PNE2 266 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 CFAP58Q5T655 872 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 TMEM164Q5U3C3 297 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 RWDD4Q6NW29 188 aaKnown RBP11.71□□□□□ -0.53
CMTM1-211ENST00000528484 ZNF574Q6ZN55 896 aaPredicted RBP11.71□□□□□ -0.53
CMTM1-211ENST00000528484 KYQ8NBH2 561 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 PCDH19Q8TAB3 1148 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 EXTL1Q92935 676 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 NT5C3BQ969T7 300 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 CENPTQ96BT3 561 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 KLHL32Q96NJ5 620 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 CMKLR1Q99788 373 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 EPAS1Q99814 870 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 EDEM3Q9BZQ6 932 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 FOXP3Q9BZS1 431 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 TCEAL2Q9H3H9 227 aaPredicted RBP11.71□□□□□ -0.53
CMTM1-211ENST00000528484 ACSL6Q9UKU0 697 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 GPR34Q9UPC5 381 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 ITM2BQ9Y287 266 aa11.71□□□□□ -0.53
CMTM1-211ENST00000528484 DOCK4Q8N1I0 1966 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 GTPBP10A4D1E9 387 aaKnown RBP11.7□□□□□ -0.54
CMTM1-211ENST00000528484 PMS2P1A4D2B8 440 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 BIN1O00499 593 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 NVLO15381 856 aaKnown RBP11.7□□□□□ -0.54
CMTM1-211ENST00000528484 ZW10O43264 779 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 MMP20O60882 483 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 RAMP2O60895 175 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 IGSF6O95976 241 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 KRT10P13645 584 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 SLC9A1P19634 815 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 CD82P27701 267 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 CCKBRP32239 447 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 SUOXP51687 545 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 HK3P52790 923 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 LRRC14Q15048 493 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 TPD52L1Q16890 204 aaPredicted RBP11.7□□□□□ -0.54
CMTM1-211ENST00000528484 KLHL40Q2TBA0 621 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 MYLK3Q32MK0 819 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 TPRG1LQ5T0D9 272 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 OTUD1Q5VV17 481 aaPredicted RBP11.7□□□□□ -0.54
CMTM1-211ENST00000528484 ENPP7Q6UWV6 458 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 GDPD4Q6W3E5 623 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 RD3Q7Z3Z2 195 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 SLC47A2Q86VL8 602 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 FAM131BQ86XD5 332 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 EXD3Q8N9H8 876 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 CASKIN2Q8WXE0 1202 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 ARHGEF2Q92974 986 aaKnown RBP11.7□□□□□ -0.54
CMTM1-211ENST00000528484 GDAP1L1Q96MZ0 367 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 NCAPGQ9BPX3 1015 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 CLPBQ9H078 707 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 MAGEH1Q9H213 219 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 LRRN3Q9H3W5 708 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 ANLNQ9NQW6 1124 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 STARD5Q9NSY2 213 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 GGT7Q9UJ14 662 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 LOXL2Q9Y4K0 774 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 PTPN13Q12923 2485 aa11.7□□□□□ -0.54
CMTM1-211ENST00000528484 UBR5O95071 2799 aaPredicted RBP11.69□□□□□ -0.54
CMTM1-211ENST00000528484 GOLGA8SH3BPF8 625 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 TNFP01375 233 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 TFE3P19532 575 aaPredicted RBP11.69□□□□□ -0.54
CMTM1-211ENST00000528484 GKP32189 559 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 MTIF2P46199 727 aaKnown RBP11.69□□□□□ -0.54
CMTM1-211ENST00000528484 GABRB2P47870 512 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 CCL7P80098 99 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 MORC3Q14149 939 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 ARHGEF7Q14155 803 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 ERAP2Q6P179 960 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 B3GNT8Q7Z7M8 397 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 CCNJLQ8IV13 435 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 TSACCQ96A04 125 aaPredicted RBP11.69□□□□□ -0.54
CMTM1-211ENST00000528484 SEMA3CQ99985 751 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 WRAP53Q9BUR4 548 aaKnown RBP11.69□□□□□ -0.54
CMTM1-211ENST00000528484 PLCB1Q9NQ66 1216 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 KLQ9UEF7 1012 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 OR12D3Q9UGF7 316 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 DNAI1Q9UI46 699 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 DNAJC12Q9UKB3 198 aa11.69□□□□□ -0.54
CMTM1-211ENST00000528484 COL27A1Q8IZC6 1860 aaPredicted RBP11.69□□□□□ -0.54
CMTM1-211ENST00000528484 TLN1Q9Y490 2541 aaKnown RBP11.68□□□□□ -0.54
CMTM1-211ENST00000528484 A0A1W2PQC6 194 aa11.68□□□□□ -0.54
CMTM1-211ENST00000528484 I6L893 689 aaPredicted RBP11.68□□□□□ -0.54
CMTM1-211ENST00000528484 TERTO14746 1132 aaKnown RBP11.68□□□□□ -0.54
CMTM1-211ENST00000528484 AREL1O15033 823 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms