RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 TOR4AQ9NXH8 423 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 IPO11Q9UI26 975 aaKnown RBP33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 TRPM6Q9BX84 2022 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 DOCK9Q9BZ29 2069 aa33.44■■■□□ 2.94
SSSCA1-205ENST00000527920 A6NNZ2 444 aa33.43■■■□□ 2.94
SSSCA1-205ENST00000527920 PALMO75781 387 aa33.43■■■□□ 2.94
SSSCA1-205ENST00000527920 SGCGQ13326 291 aa33.43■■■□□ 2.94
SSSCA1-205ENST00000527920 HADHQ16836 314 aaKnown RBP33.43■■■□□ 2.94
SSSCA1-205ENST00000527920 TXNRD3NBQ6F5E7 133 aa33.43■■■□□ 2.94
SSSCA1-205ENST00000527920 GATAD2AQ86YP4 633 aa33.43■■■□□ 2.94
SSSCA1-205ENST00000527920 IFT43Q96FT9 208 aa33.43■■■□□ 2.94
SSSCA1-205ENST00000527920 KLHL11Q9NVR0 708 aa33.43■■■□□ 2.94
SSSCA1-205ENST00000527920 INSIG1O15503 277 aa33.42■■■□□ 2.94
SSSCA1-205ENST00000527920 PAK4O96013 591 aaPredicted RBP33.42■■■□□ 2.94
SSSCA1-205ENST00000527920 SPINK2P20155 84 aa33.42■■■□□ 2.94
SSSCA1-205ENST00000527920 NSUN2Q08J23 767 aaKnown RBP eCLIP33.42■■■□□ 2.94
SSSCA1-205ENST00000527920 KANSL1Q7Z3B3 1105 aa33.42■■■□□ 2.94
SSSCA1-205ENST00000527920 SLCO6A1Q86UG4 719 aa33.42■■■□□ 2.94
SSSCA1-205ENST00000527920 OR13H1Q8NG92 308 aa33.42■■■□□ 2.94
SSSCA1-205ENST00000527920 CTTNBP2NLQ9P2B4 639 aa33.42■■■□□ 2.94
SSSCA1-205ENST00000527920 FTSJ1Q9UET6 329 aa33.42■■■□□ 2.94
SSSCA1-205ENST00000527920 ITM2BQ9Y287 266 aa33.42■■■□□ 2.94
SSSCA1-205ENST00000527920 MSRB2Q9Y3D2 182 aa33.42■■■□□ 2.94
SSSCA1-205ENST00000527920 COL5A1P20908 1838 aaPredicted RBP33.42■■■□□ 2.94
SSSCA1-205ENST00000527920 MAP1BP46821 2468 aaKnown RBP33.41■■■□□ 2.94
SSSCA1-205ENST00000527920 IGLON5A6NGN9 336 aa33.41■■■□□ 2.94
SSSCA1-205ENST00000527920 PROSCO94903 275 aa33.41■■■□□ 2.94
SSSCA1-205ENST00000527920 TIMP2P16035 220 aa33.41■■■□□ 2.94
SSSCA1-205ENST00000527920 AMPD1P23109 780 aa33.41■■■□□ 2.94
SSSCA1-205ENST00000527920 SERPINB6P35237 376 aa33.41■■■□□ 2.94
SSSCA1-205ENST00000527920 BRAT1Q6PJG6 821 aa33.41■■■□□ 2.94
SSSCA1-205ENST00000527920 SARM1Q6SZW1 724 aa33.41■■■□□ 2.94
SSSCA1-205ENST00000527920 TSEN2Q8NCE0 465 aaKnown RBP33.41■■■□□ 2.94
SSSCA1-205ENST00000527920 BMFQ96LC9 184 aa33.41■■■□□ 2.94
SSSCA1-205ENST00000527920 PSKH2Q96QS6 385 aa33.41■■■□□ 2.94
SSSCA1-205ENST00000527920 KLF6Q99612 283 aaPredicted RBP33.41■■■□□ 2.94
SSSCA1-205ENST00000527920 CINPQ9BW66 212 aaPredicted RBP33.41■■■□□ 2.94
SSSCA1-205ENST00000527920 SUV39H2Q9H5I1 410 aa33.41■■■□□ 2.94
SSSCA1-205ENST00000527920 GGT7Q9UJ14 662 aa33.41■■■□□ 2.94
SSSCA1-205ENST00000527920 ATXN1LP0C7T5 689 aaKnown RBP33.4■■■□□ 2.94
SSSCA1-205ENST00000527920 TMEM253P0C7T8 217 aa33.4■■■□□ 2.94
SSSCA1-205ENST00000527920 CLDN2P57739 230 aa33.4■■■□□ 2.94
SSSCA1-205ENST00000527920 TMCO4Q5TGY1 634 aa33.4■■■□□ 2.94
SSSCA1-205ENST00000527920 ARHGAP36Q6ZRI8 547 aa33.4■■■□□ 2.94
SSSCA1-205ENST00000527920 CNGA4Q8IV77 575 aa33.4■■■□□ 2.94
SSSCA1-205ENST00000527920 CHCHD4Q8N4Q1 142 aa33.4■■■□□ 2.94
SSSCA1-205ENST00000527920 ETNK2Q9NVF9 386 aa33.4■■■□□ 2.94
SSSCA1-205ENST00000527920 SEPT3Q9UH03 358 aa33.4■■■□□ 2.94
SSSCA1-205ENST00000527920 RAD51BO15315 384 aa33.39■■■□□ 2.94
SSSCA1-205ENST00000527920 AKR1B10O60218 316 aa33.39■■■□□ 2.94
SSSCA1-205ENST00000527920 PIGNO95427 931 aa33.39■■■□□ 2.94
SSSCA1-205ENST00000527920 RENBPP51606 427 aa33.39■■■□□ 2.94
SSSCA1-205ENST00000527920 ELP6Q0PNE2 266 aa33.39■■■□□ 2.94
SSSCA1-205ENST00000527920 SRLQ86TD4 932 aa33.39■■■□□ 2.94
SSSCA1-205ENST00000527920 TMEM121BQ9BXQ6 578 aaPredicted RBP33.39■■■□□ 2.94
SSSCA1-205ENST00000527920 PACSIN1Q9BY11 444 aa33.39■■■□□ 2.94
SSSCA1-205ENST00000527920 ATP13A3Q9H7F0 1226 aa33.39■■■□□ 2.94
SSSCA1-205ENST00000527920 KLK13Q9UKR3 277 aa33.39■■■□□ 2.94
SSSCA1-205ENST00000527920 FPGTO14772 594 aa33.38■■■□□ 2.93
SSSCA1-205ENST00000527920 MAN1A1P33908 653 aa33.38■■■□□ 2.93
SSSCA1-205ENST00000527920 RABIFP47224 123 aa33.38■■■□□ 2.93
SSSCA1-205ENST00000527920 RGRP47804 291 aa33.38■■■□□ 2.93
SSSCA1-205ENST00000527920 CDH6P55285 790 aa33.38■■■□□ 2.93
SSSCA1-205ENST00000527920 BNIP3Q12983 259 aa33.38■■■□□ 2.93
SSSCA1-205ENST00000527920 KRT81Q14533 505 aa33.38■■■□□ 2.93
SSSCA1-205ENST00000527920 UNQ6494/PRO21346Q6UXR6 183 aa33.38■■■□□ 2.93
SSSCA1-205ENST00000527920 Q6ZSR6 202 aa33.38■■■□□ 2.93
SSSCA1-205ENST00000527920 LRRC49Q8IUZ0 686 aa33.38■■■□□ 2.93
SSSCA1-205ENST00000527920 TP53INP2Q8IXH6 220 aa33.38■■■□□ 2.93
SSSCA1-205ENST00000527920 SLC22A18ASQ8N1D0 253 aa33.38■■■□□ 2.93
SSSCA1-205ENST00000527920 PNPLA1Q8N8W4 532 aa33.38■■■□□ 2.93
SSSCA1-205ENST00000527920 CALN1Q9BXU9 219 aa33.38■■■□□ 2.93
SSSCA1-205ENST00000527920 POM121BA6NF01 834 aa33.37■■■□□ 2.93
SSSCA1-205ENST00000527920 BUB1BO60566 1050 aaPredicted RBP33.37■■■□□ 2.93
SSSCA1-205ENST00000527920 XPAP23025 273 aaPredicted RBP33.37■■■□□ 2.93
SSSCA1-205ENST00000527920 IL4RP24394 825 aa33.37■■■□□ 2.93
SSSCA1-205ENST00000527920 SERPINA4P29622 427 aa33.37■■■□□ 2.93
SSSCA1-205ENST00000527920 ARSEP51690 589 aa33.37■■■□□ 2.93
SSSCA1-205ENST00000527920 AP1S1P61966 158 aa33.37■■■□□ 2.93
SSSCA1-205ENST00000527920 UGP2Q16851 508 aa33.37■■■□□ 2.93
SSSCA1-205ENST00000527920 TMEM52BQ4KMG9 183 aa33.37■■■□□ 2.93
SSSCA1-205ENST00000527920 PTAR1Q7Z6K3 402 aaPredicted RBP33.37■■■□□ 2.93
SSSCA1-205ENST00000527920 CXorf40AQ8TE69 158 aa33.37■■■□□ 2.93
SSSCA1-205ENST00000527920 GATA6Q92908 595 aa33.37■■■□□ 2.93
SSSCA1-205ENST00000527920 CCDC42Q96M95 316 aa33.37■■■□□ 2.93
SSSCA1-205ENST00000527920 C1QTNF7Q9BXJ2 289 aa33.37■■■□□ 2.93
SSSCA1-205ENST00000527920 HSPA9P38646 679 aaKnown RBP33.36■■■□□ 2.93
SSSCA1-205ENST00000527920 ADKP55263 362 aaKnown RBP33.36■■■□□ 2.93
SSSCA1-205ENST00000527920 TBX2Q13207 712 aaPredicted RBP33.36■■■□□ 2.93
SSSCA1-205ENST00000527920 LBRQ14739 615 aaKnown RBP33.36■■■□□ 2.93
SSSCA1-205ENST00000527920 CFAP58Q5T655 872 aa33.36■■■□□ 2.93
SSSCA1-205ENST00000527920 CAMK1DQ8IU85 385 aa33.36■■■□□ 2.93
SSSCA1-205ENST00000527920 CENPTQ96BT3 561 aa33.36■■■□□ 2.93
SSSCA1-205ENST00000527920 ECHDC3Q96DC8 303 aa33.36■■■□□ 2.93
SSSCA1-205ENST00000527920 CHP1Q99653 195 aa33.36■■■□□ 2.93
SSSCA1-205ENST00000527920 NHEJ1Q9H9Q4 299 aaPredicted RBP33.36■■■□□ 2.93
SSSCA1-205ENST00000527920 PCDHGA1Q9Y5H4 931 aa33.36■■■□□ 2.93
SSSCA1-205ENST00000527920 MAFKO60675 156 aa33.35■■■□□ 2.93
SSSCA1-205ENST00000527920 TM7SF2O76062 418 aa33.35■■■□□ 2.93
SSSCA1-205ENST00000527920 LDOC1O95751 146 aaPredicted RBP33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms