RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 PIAS2O75928 621 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 RNF8O76064 485 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 IGSF6O95976 241 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 GYPCP04921 128 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 FAM228BP0C875 321 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 MYBL1P10243 752 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 MYF5P13349 255 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 HCAR3P49019 387 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 PFN3P60673 137 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 ZBED6P86452 979 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 SEMG2Q02383 582 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 EIF2B5Q13144 721 aaKnown RBP10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 SGCGQ13326 291 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 DPYSQ14117 519 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 ZSCAN23Q3MJ62 389 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 PPP6R3Q5H9R7 873 aaPredicted RBP10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 KYAT3Q6YP21 454 aaKnown RBP10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 PTAR1Q7Z6K3 402 aaPredicted RBP10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 CPNE8Q86YQ8 564 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 MDM1Q8TC05 714 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 ARHGEF26Q96DR7 871 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 CPEB1Q9BZB8 566 aaKnown RBP10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 MBNL1Q9NR56 388 aaKnown RBP10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 ETNK2Q9NVF9 386 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 IFNKQ9P0W0 207 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 DKK3Q9UBP4 350 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 PNMA8BQ9ULN7 279 aaPredicted RBP10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 NENFQ9UMX5 172 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 PCDHGA1Q9Y5H4 931 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 SCINQ9Y6U3 715 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 DMXL2Q8TDJ6 3036 aa10.56□□□□□ -0.72
PRPF40B-204ENST00000527253 URB1O60287 2271 aaKnown RBP10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 FAM208BQ5VWN6 2430 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 CFAP47Q6ZTR5 3102 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 LY6G6EA0A0G2JKS1 128 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 SPTY2D1-AS1A0A0U1RR47 76 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 TTC24A2A3L6 582 aaPredicted RBP10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 TRABD2BA6NFA1 517 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 ARHGAP42A6NI28 874 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 EIF3CLB5ME19 914 aaKnown RBP10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 NEMP1O14524 444 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 FFAR2O15552 330 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 DAPK3O43293 454 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 RFPL3O75679 317 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 PEX11BO96011 259 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 PRKCGP05129 697 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 SERPING1P05155 500 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 CYP1A2P05177 515 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 RARAP10276 462 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 CKMT2P17540 419 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 AMPD1P23109 780 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 PCK1P35558 622 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 IGFALSP35858 605 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 ZNF211Q13398 564 aaPredicted RBP10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 SMTNL2Q2TAL5 461 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 TMEM52BQ4KMG9 183 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 TDRD12Q587J7 1177 aaKnown RBP10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 NYAP1Q6ZVC0 841 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 SRLQ86TD4 932 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 VPS36Q86VN1 386 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 PROSER1Q86XN7 944 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 CAMK1DQ8IU85 385 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 PSTKQ8IV42 348 aaKnown RBP10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 GALNT15Q8N3T1 639 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 TSEN2Q8NCE0 465 aaKnown RBP10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 TRIM11Q96F44 468 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 IFT43Q96FT9 208 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 EIF3CQ99613 913 aaKnown RBP10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 WRAP53Q9BUR4 548 aaKnown RBP10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 XPO4Q9C0E2 1151 aaKnown RBP10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 TCEAL2Q9H3H9 227 aaPredicted RBP10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 SUV39H2Q9H5I1 410 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 ZWILCHQ9H900 591 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 MRPL47Q9HD33 250 aaKnown RBP10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 DNAJC28Q9NX36 388 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 BZW2Q9Y6E2 419 aaKnown RBP10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 U3KQA8 63 aa10.55□□□□□ -0.72
PRPF40B-204ENST00000527253 ASXL3Q9C0F0 2248 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 DFFAO00273 331 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 FPGTO14772 594 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 NEBLO76041 1014 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 CSF2P04141 144 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 C1SP09871 688 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 DESP17661 470 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 IL4RP24394 825 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 ACP1P24666 158 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 CASP14P31944 242 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 RABIFP47224 123 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 CSNK1DP48730 415 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 TPM4P67936 248 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 SLC25A11Q02978 314 aaKnown RBP10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 RAD51Q06609 339 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 CYP4F3Q08477 520 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 PDE1CQ14123 709 aaPredicted RBP10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 ACAP1Q15027 740 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 DPYSL2Q16555 572 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 UGP2Q16851 508 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 LRRK1Q38SD2 2015 aa10.54□□□□□ -0.72
PRPF40B-204ENST00000527253 POLNQ7Z5Q5 900 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms