RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 C1orf74Q96LT6 269 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 EPAS1Q99814 870 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 C1QTNF7Q9BXJ2 289 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 SLC25A18Q9H1K4 315 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 GEMIN8Q9NWZ8 242 aaKnown RBP13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 RRN3Q9NYV6 651 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 FOXJ2Q9P0K8 574 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 ZDHHC9Q9Y397 364 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 PCDHB11Q9Y5F2 797 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 NBPF19A0A087WUL8 3843 aa13.19□□□□□ -0.3
CLNS1A-207ENST00000527133 SCN8AQ9UQD0 1980 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 AREL1O15033 823 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 TM7SF2O76062 418 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 CD160O95971 181 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 ETV5P41161 510 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 BLKP51451 505 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 HK3P52790 923 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 MAPK10P53779 464 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 UBAP2LQ14157 1087 aaKnown RBP13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 ALG11Q2TAA5 492 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 PTPN20Q4JDL3 420 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 ARTNQ5T4W7 220 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 TTI2Q6NXR4 508 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 LVRNQ6Q4G3 990 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 ENOSF1Q7L5Y1 443 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 RD3Q7Z3Z2 195 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 PTRH1Q86Y79 214 aaKnown RBP13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 CCNJLQ8IV13 435 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 TP53I13Q8NBR0 393 aaPredicted RBP13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 ZNF397Q8NF99 534 aaPredicted RBP13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 SPATA20Q8TB22 786 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 USP7Q93009 1102 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 ISG20Q96AZ6 181 aaKnown RBP13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 KLHL32Q96NJ5 620 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 TBCBQ99426 244 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 FUCA2Q9BTY2 467 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 WRAP53Q9BUR4 548 aaKnown RBP13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 EDEM3Q9BZQ6 932 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 ZYG11BQ9C0D3 744 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 ZNF212Q9UDV6 495 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 STAP1Q9ULZ2 295 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 PCDHGC3Q9UN70 934 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 PAXBP1Q9Y5B6 917 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 NBASA2RRP1 2371 aa13.18□□□□□ -0.3
CLNS1A-207ENST00000527133 USP9YO00507 2555 aaPredicted RBP13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 TOR1BO14657 336 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 RASGRP1O95267 797 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 ACVRL1P37023 503 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 SNX16P57768 344 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 POLD3Q15054 466 aaPredicted RBP13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 IRF4Q15306 451 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 KLHL40Q2TBA0 621 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 LEKR1Q6ZMV7 388 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 NYAP1Q6ZVC0 841 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 TTC7BQ86TV6 843 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 GKN2Q86XP6 184 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 DTX1Q86Y01 620 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 PLPP6Q8IY26 295 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 OR6C4Q8NGE1 309 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 CXorf40AQ8TE69 158 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 NELFBQ8WX92 580 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 JPH3Q8WXH2 748 aaPredicted RBP13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 CRACR2AQ9BSW2 395 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 UNC13CQ8NB66 2214 aa13.17□□□□□ -0.3
CLNS1A-207ENST00000527133 SPTAN1Q13813 2472 aaKnown RBP13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 A0A1W2PQC6 194 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 C9orf172C9J069 976 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 F9P00740 461 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 GP1BBP13224 206 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 ITIH2P19823 946 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 SNRPD1P62314 119 aaKnown RBP13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 APBA1Q02410 837 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 ZFP36L1Q07352 338 aaKnown RBP13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 MORC3Q14149 939 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 SKIDA1Q1XH10 827 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 MYLK3Q32MK0 819 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 ATXN7L2Q5T6C5 722 aaPredicted RBP13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 PHF19Q5T6S3 580 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 ACBD5Q5T8D3 534 aaPredicted RBP13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 TRIM65Q6PJ69 517 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 ENPP7Q6UWV6 458 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 GDPD4Q6W3E5 623 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 OR2AP1Q8NGE2 309 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 ZNF564Q8TBZ8 553 aaPredicted RBP13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 NT5C3BQ969T7 300 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 VOPP1Q96AW1 172 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 TMEM159Q96B96 161 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 PGAP3Q96FM1 320 aaPredicted RBP13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 CMKLR1Q99788 373 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 OSBPL1AQ9BXW6 950 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 EPN3Q9H201 632 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 PLCB1Q9NQ66 1216 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 CTNND2Q9UQB3 1225 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 RNF215Q9Y6U7 377 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 DOCK4Q8N1I0 1966 aa13.16□□□□□ -0.3
CLNS1A-207ENST00000527133 SPENQ96T58 3664 aaKnown RBP13.15□□□□□ -0.3
CLNS1A-207ENST00000527133 FAM170AA1A519 330 aa13.15□□□□□ -0.3
CLNS1A-207ENST00000527133 POP4O95707 220 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms