RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 PPP1R9BQ96SB3 815 aa13.69□□□□□ -0.22
SSRP1-203ENST00000526696 RBM15Q96T37 977 aaKnown RBP eCLIP13.69□□□□□ -0.222e-6■■■□□ 16.9
SSRP1-203ENST00000526696 UNKQ9C0B0 810 aaKnown RBP13.69□□□□□ -0.22
SSRP1-203ENST00000526696 ZSCAN16Q9H4T2 348 aaPredicted RBP13.69□□□□□ -0.22
SSRP1-203ENST00000526696 TMEM8AQ9HCN3 771 aa13.69□□□□□ -0.22
SSRP1-203ENST00000526696 SLC39A1Q9NY26 324 aa13.69□□□□□ -0.22
SSRP1-203ENST00000526696 KCTD3Q9Y597 815 aa13.69□□□□□ -0.22
SSRP1-203ENST00000526696 NIPBLQ6KC79 2804 aaeCLIP13.69□□□□□ -0.22
SSRP1-203ENST00000526696 A0A0D9SEW6 157 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 NUDT21O43809 227 aaKnown RBP13.68□□□□□ -0.22
SSRP1-203ENST00000526696 TRUB2O95900 331 aaKnown RBP13.68□□□□□ -0.22
SSRP1-203ENST00000526696 CALCAP01258 141 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 CD1CP29017 333 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 GKP32189 559 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 SRP54P61011 504 aaKnown RBP13.68□□□□□ -0.22
SSRP1-203ENST00000526696 AMPD3Q01432 767 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 IRF4Q15306 451 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 ENPP7Q6UWV6 458 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 TMEM135Q86UB9 458 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 UBR7Q8N806 425 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 BMPERQ8N8U9 685 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 ATP6V0D2Q8N8Y2 350 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 CCDC150Q8NCX0 1101 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 KIAA1143Q96AT1 154 aaPredicted RBP13.68□□□□□ -0.22
SSRP1-203ENST00000526696 RTP4Q96DX8 246 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 MUC3BQ9H195 1237 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 CUEDC2Q9H467 287 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 CYP4F12Q9HCS2 524 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 KCND3Q9UK17 655 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 VANGL2Q9ULK5 521 aa13.68□□□□□ -0.22
SSRP1-203ENST00000526696 C16orf96A6NNT2 1141 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 B4DGG1 531 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 PDXKO00764 312 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 AREL1O15033 823 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 MMP20O60882 483 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 FBXO21O94952 628 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 VDRP11473 427 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 ITIH2P19823 946 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 PDCP20941 246 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 MPSTP25325 297 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 MAP4P27816 1152 aaKnown RBP13.67□□□□□ -0.22
SSRP1-203ENST00000526696 CLCN6P51797 869 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 LIMK2P53671 638 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 KRT83P78385 493 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 MC1RQ01726 317 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 ABHD18Q0P651 414 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 DPYDQ12882 1025 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 CUL4BQ13620 913 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 INPP5JQ15735 1006 aaPredicted RBP13.67□□□□□ -0.22
SSRP1-203ENST00000526696 EDRF1Q3B7T1 1238 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 LRRC73Q5JTD7 316 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 ZNF438Q7Z4V0 828 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 SLC34A3Q8N130 599 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 AGBL5Q8NDL9 886 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 FAM46DQ8NEK8 389 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 FUBP1Q96AE4 644 aaKnown RBP13.67□□□□□ -0.22
SSRP1-203ENST00000526696 FAM149B1Q96BN6 582 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 TMX3Q96JJ7 454 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 HEPHQ9BQS7 1158 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 ASPSCR1Q9BZE9 553 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 TMEM9Q9P0T7 183 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 FRMD4BQ9Y2L6 1034 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 ACTL7AQ9Y615 435 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 MORC2Q9Y6X9 1032 aaPredicted RBP13.67□□□□□ -0.22
SSRP1-203ENST00000526696 DOCK4Q8N1I0 1966 aa13.67□□□□□ -0.22
SSRP1-203ENST00000526696 DCHS2Q6V1P9 2916 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 PVALEFA0A1B0GWK0 134 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 ARHGAP10A1A4S6 786 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 B4E171 279 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 NEMP1O14524 444 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 TOR1BO14657 336 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 MAPK13O15264 365 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 HNRNPRO43390 633 aaKnown RBP13.66□□□□□ -0.22
SSRP1-203ENST00000526696 KLRC4O43908 158 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 RFPL1O75677 317 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 DNAJB5O75953 348 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 THRAP10827 490 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 CSF2RBP32927 897 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 TSPAN7P41732 249 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 PEX5P50542 639 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 CCNHP51946 323 aaPredicted RBP13.66□□□□□ -0.22
SSRP1-203ENST00000526696 MAZP56270 477 aaKnown RBP13.66□□□□□ -0.22
SSRP1-203ENST00000526696 NFATC4Q14934 902 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 SLC39A14Q15043 492 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 C5orf22Q49AR2 442 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 ALFQ53S48 1182 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 DCAF12Q5T6F0 453 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 SPECC1LQ69YQ0 1117 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 KRT39Q6A163 491 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 FOXR2Q6PJQ5 311 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 FAM186BQ8IYM0 893 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 CCL4L1Q8NHW4 92 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 HSFY1Q96LI6 401 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 USP28Q96RU2 1077 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 CTRCQ99895 268 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 EFHD1Q9BUP0 239 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 C2orf49Q9BVC5 232 aaPredicted RBP13.66□□□□□ -0.22
SSRP1-203ENST00000526696 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.66□□□□□ -0.22
SSRP1-203ENST00000526696 RAB20Q9NX57 234 aa13.66□□□□□ -0.22
SSRP1-203ENST00000526696 HS3ST4Q9Y661 456 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms