RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 AP4B1Q9Y6B7 739 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 MLH3Q9UHC1 1453 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 FAM237BA0A1B0GVD1 139 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 ZW10O43264 779 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 OR1I1O60431 355 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 FBXO21O94952 628 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 MUTP22033 750 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 ADRA1DP25100 572 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 RPA3P35244 121 aaPredicted RBP13.77□□□□□ -0.2
LRRK1-202ENST00000525284 RPP38P78345 283 aaKnown RBP13.77□□□□□ -0.2
LRRK1-202ENST00000525284 DNASE1L3Q13609 305 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 GALNT18Q6P9A2 607 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 RP9Q8TA86 221 aaKnown RBP13.77□□□□□ -0.2
LRRK1-202ENST00000525284 ZNF471Q9BX82 626 aaPredicted RBP13.77□□□□□ -0.2
LRRK1-202ENST00000525284 VPS4AQ9UN37 437 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 ST3GAL5Q9UNP4 418 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 TRIM17Q9Y577 477 aa13.77□□□□□ -0.2
LRRK1-202ENST00000525284 C5orf51A6NDU8 294 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 TPP1O14773 563 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 COX4I1P13073 169 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 ABCG1P45844 678 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 AFF1P51825 1210 aaKnown RBP13.77□□□□□ -0.21
LRRK1-202ENST00000525284 HDAC2Q92769 488 aaKnown RBP13.77□□□□□ -0.21
LRRK1-202ENST00000525284 SKA1Q96BD8 255 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 ASB2Q96Q27 587 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 FAM126AQ9BYI3 521 aaPredicted RBP13.77□□□□□ -0.21
LRRK1-202ENST00000525284 METTL8Q9H825 291 aaKnown RBP13.77□□□□□ -0.21
LRRK1-202ENST00000525284 ZNF639Q9UID6 485 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 ZNF214Q9UL59 606 aaPredicted RBP13.77□□□□□ -0.21
LRRK1-202ENST00000525284 H7C1W4 665 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 IFNGP01579 166 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 FDX1P10109 184 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 RRM1P23921 792 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 PTX3P26022 381 aaPredicted RBP13.77□□□□□ -0.21
LRRK1-202ENST00000525284 DNASE1L1P49184 302 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 IRF8Q02556 426 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 CRTC3Q6UUV7 619 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 EDEM1Q92611 657 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 RNF181Q9P0P0 153 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 ALG5Q9Y673 324 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 PPEF2O14830 753 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 PIK3CGP48736 1102 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 ZBTB6Q15916 424 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 HSDL1Q3SXM5 330 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 GPR65Q8IYL9 337 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 RASGEF1AQ8N9B8 481 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 ZFP28Q8NHY6 868 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 PANX3Q96QZ0 392 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 NECTIN3Q9NQS3 549 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 KCNK4Q9NYG8 393 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 BTRCQ9Y297 605 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 MAU2Q9Y6X3 613 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 NCAPD2Q15021 1401 aa13.77□□□□□ -0.21
LRRK1-202ENST00000525284 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 THEGLP0DJG4 465 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 RENBPP51606 427 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 BCAT1P54687 386 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 ACTR3P61158 418 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 SETMARQ53H47 684 aaPredicted RBP13.76□□□□□ -0.21
LRRK1-202ENST00000525284 FAM91A1Q658Y4 838 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 JAZF1Q86VZ6 243 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 CCNB1IP1Q9NPC3 277 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 REXO2Q9Y3B8 237 aaKnown RBP13.76□□□□□ -0.21
LRRK1-202ENST00000525284 U3KQV3 271 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 SLC28A2O43868 658 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 ZC3H11AO75152 810 aaKnown RBP eCLIP13.76□□□□□ -0.21
LRRK1-202ENST00000525284 RXRBP28702 533 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 OR1E1P30953 314 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 NAA20P61599 178 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 SQLEQ14534 574 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 USP41Q3LFD5 358 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 SCIMPQ6UWF3 145 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 CGRRF1Q99675 332 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 ENTPD5O75356 428 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 KCNA5P22460 613 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 ITPKBP27987 946 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 CD40LGP29965 261 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 THPOP40225 353 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 TUFMP49411 452 aaKnown RBP13.76□□□□□ -0.21
LRRK1-202ENST00000525284 UBAP2LQ14157 1087 aaKnown RBP13.76□□□□□ -0.21
LRRK1-202ENST00000525284 PITRM1Q5JRX3 1037 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 TCEAL6Q6IPX3 200 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 PARGQ86W56 976 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 ACTL9Q8TC94 416 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 FAIM2Q9BWQ8 316 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 TLR8Q9NR97 1041 aaKnown RBP13.76□□□□□ -0.21
LRRK1-202ENST00000525284 PIM2Q9P1W9 311 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 CLTCL1P53675 1640 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 AP5Z1O43299 807 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 LRIG2O94898 1065 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 FDPSP14324 419 aaKnown RBP13.76□□□□□ -0.21
LRRK1-202ENST00000525284 PPM1AP35813 382 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 CTSKP43235 329 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 SNRPFP62306 86 aaKnown RBP13.76□□□□□ -0.21
LRRK1-202ENST00000525284 DNAAF5Q86Y56 855 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 SLC41A1Q8IVJ1 513 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 ZNF563Q8TA94 476 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 GRPEL2Q8TAA5 225 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 SGCDQ92629 289 aa13.76□□□□□ -0.21
LRRK1-202ENST00000525284 SLC5A5Q92911 643 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms