RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 KDM1BQ8NB78 822 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 GLIS1Q8NBF1 620 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TMIEQ8NEW7 156 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 LPCAT1Q8NF37 534 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 OR2I1PQ8NGU4 316 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 ARRDC2Q8TBH0 407 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 HTR3CQ8WXA8 447 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 MAML1Q92585 1016 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 PIGKQ92643 395 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 NELL1Q92832 810 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TCEAL3Q969E4 200 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 ISG20Q96AZ6 181 aaKnown RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 BIRC7Q96CA5 298 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TRIM44Q96DX7 344 aaPredicted RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 SPACA7Q96KW9 195 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 CALR3Q96L12 384 aaKnown RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 CCDC114Q96M63 670 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 ZNF599Q96NL3 588 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TSGA13Q96PP4 275 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 PSKH2Q96QS6 385 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 NUDCD1Q96RS6 583 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 OSBPL9Q96SU4 736 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 IL12RB2Q99665 862 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 HINFPQ9BQA5 517 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 GORASP1Q9BQQ3 440 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 BTBD1Q9H0C5 482 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 ARRDC1-AS1Q9H2J1 176 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 RETREG1Q9H6L5 497 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 EBF2Q9HAK2 575 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 DYRK4Q9NR20 520 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TMEM74BQ9NUR3 256 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 PIH1D1Q9NWS0 290 aaKnown RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 DONSONQ9NYP3 566 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 WSB2Q9NYS7 404 aaPredicted RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 KLHL8Q9P2G9 620 aaPredicted RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 EIF2B4Q9UI10 523 aaKnown RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 SNX12Q9UMY4 172 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 SMG5Q9UPR3 1016 aaKnown RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 ZFR2Q9UPR6 939 aaKnown RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 NCKAP1Q9Y2A7 1128 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 JRKLQ9Y4A0 524 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 PCDHB9Q9Y5E1 797 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 NYNRINQ9P2P1 1898 aaKnown RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 BDP1A6H8Y1 2624 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 A0A1W2PQU0 124 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 CCDC78A2IDD5 438 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 CTAGE9A4FU28 777 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 GOLGA6L9A6NEM1 432 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 IGLON5A6NGN9 336 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 ZNF487B1APH4 448 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 H0Y8X5 98 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 PDE2AO00408 941 aaPredicted RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 TRAFD1O14545 582 aaPredicted RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 SCAMP1O15126 338 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 RAD51BO15315 384 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 SLC31A1O15431 190 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 PLRG1O43660 514 aaKnown RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 ZNF217O75362 1048 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 METTL18O95568 372 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 CPP00450 1065 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 AGTP01019 485 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 IGHV4-34P06331 123 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 CR2P20023 1033 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 XPAP23025 273 aaPredicted RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 PSMB4P28070 264 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 SERPINA4P29622 427 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 HOXA6P31267 233 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 CASQ1P31415 396 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 PTPN7P35236 360 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 NR2C2P49116 596 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 VASPP50552 380 aaPredicted RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 NEK3P51956 506 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 IFI35P80217 286 aaPredicted RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 RAD51Q06609 339 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 ZNF33AQ06730 810 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 MTM1Q13496 603 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 HNRNPDQ14103 355 aaKnown RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 FGL2Q14314 439 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 RFTN1Q14699 578 aaPredicted RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 E2F5Q15329 346 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 SF3A2Q15428 464 aaKnown RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 TCEA2Q15560 299 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 ELF2Q15723 593 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 TEX44Q53QW1 395 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 ANKRD20A2Q5SQ80 823 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 PRAMEF14Q5SWL7 426 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 ANKRD20A1Q5TYW2 823 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 ANKRD20A3Q5VUR7 823 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 FAM46CQ5VWP2 391 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 PMS2CLQ68D20 193 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 KIAA0895LQ68EN5 471 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 TTC27Q6P3X3 843 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 ZC3H14Q6PJT7 736 aaKnown RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 LPCAT2Q7L5N7 544 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 TSPAN33Q86UF1 283 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 VSIG1Q86XK7 387 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 CDKL3Q8IVW4 592 aaPredicted RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 KLHL7Q8IXQ5 586 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 BBS5Q8N3I7 341 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 ZCCHC9Q8N567 271 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms