RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 KIAA1143Q96AT1 154 aaPredicted RBP9.45□□□□□ -0.9
PTPN12-216ENST00000523952 INTS4Q96HW7 963 aaKnown RBP9.45□□□□□ -0.9
PTPN12-216ENST00000523952 HAPLN3Q96S86 360 aa9.45□□□□□ -0.9
PTPN12-216ENST00000523952 PSMB7Q99436 277 aa9.45□□□□□ -0.9
PTPN12-216ENST00000523952 CEP44Q9C0F1 390 aa9.45□□□□□ -0.9
PTPN12-216ENST00000523952 ATP13A1Q9HD20 1204 aa9.45□□□□□ -0.9
PTPN12-216ENST00000523952 HECAQ9UBI9 543 aaPredicted RBP9.45□□□□□ -0.9
PTPN12-216ENST00000523952 ARMCX3Q9UH62 379 aaPredicted RBP9.45□□□□□ -0.9
PTPN12-216ENST00000523952 ITM2BQ9Y287 266 aa9.45□□□□□ -0.9
PTPN12-216ENST00000523952 HS3ST4Q9Y661 456 aa9.45□□□□□ -0.9
PTPN12-216ENST00000523952 RNF225M0QZC1 329 aaPredicted RBP9.44□□□□□ -0.9
PTPN12-216ENST00000523952 RNF103O00237 685 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 KRIT1O00522 736 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 SLC16A3O15427 465 aaKnown RBP9.44□□□□□ -0.9
PTPN12-216ENST00000523952 CAPN5O15484 640 aaPredicted RBP9.44□□□□□ -0.9
PTPN12-216ENST00000523952 THAP12O43422 761 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 VPS4BO75351 444 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 GRAP2O75791 330 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 TNFP01375 233 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 PRKAR1AP10644 381 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 LIFP15018 202 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 PFKFB1P16118 471 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 GPD2P43304 727 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 SERPINH1P50454 418 aaKnown RBP9.44□□□□□ -0.9
PTPN12-216ENST00000523952 SLC20A2Q08357 652 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 POLD3Q15054 466 aaPredicted RBP9.44□□□□□ -0.9
PTPN12-216ENST00000523952 ZNF805Q5CZA5 627 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 FHL5Q5TD97 284 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 ADGRD1Q6QNK2 874 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 RRAGAQ7L523 313 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 TAF8Q7Z7C8 310 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 TTC7BQ86TV6 843 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 CACNA2D3Q8IZS8 1091 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 FAM46DQ8NEK8 389 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 NKD1Q969G9 470 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 CCDC34Q96HJ3 373 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 TAAR9Q96RI9 348 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 EPAS1Q99814 870 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 ZSWIM1Q9BR11 485 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 TM6SF2Q9BZW4 377 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 B3GNT4Q9C0J1 378 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 WDCPQ9H6R7 721 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 LRIT1Q9P2V4 623 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 KLQ9UEF7 1012 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 VPS4AQ9UN37 437 aa9.44□□□□□ -0.9
PTPN12-216ENST00000523952 A0A0D9SEW6 157 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 B4DGG1 531 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.43□□□□□ -0.9
PTPN12-216ENST00000523952 MTSS1O43312 755 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 MMP20O60882 483 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 HSF2BPO75031 334 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 LETM1O95202 739 aaPredicted RBP9.43□□□□□ -0.9
PTPN12-216ENST00000523952 CPNE6O95741 557 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 UGT2B4P06133 528 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 GLI1P08151 1106 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 PNLIPP16233 465 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 ABL2P42684 1182 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 SYKP43405 635 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 FMO5P49326 533 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 PEX5P50542 639 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 COPB1P53618 953 aaKnown RBP9.43□□□□□ -0.9
PTPN12-216ENST00000523952 SNX16P57768 344 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 SRP54P61011 504 aaKnown RBP9.43□□□□□ -0.9
PTPN12-216ENST00000523952 SNRPD1P62314 119 aaKnown RBP9.43□□□□□ -0.9
PTPN12-216ENST00000523952 RAD51Q06609 339 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 ZFP36L1Q07352 338 aaKnown RBP9.43□□□□□ -0.9
PTPN12-216ENST00000523952 KLRB1Q12918 225 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 TAF5Q15542 800 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 KLHL40Q2TBA0 621 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 AMZ1Q400G9 498 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 ZCWPW2Q504Y3 356 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 ALFQ53S48 1182 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 LRRC73Q5JTD7 316 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 ATL3Q6DD88 541 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 DENND1BQ6P3S1 775 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 SPRED1Q7Z699 444 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 TEX19Q8NA77 164 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 OR7D4Q8NG98 312 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 OR6K2Q8NGY2 324 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 STK32AQ8WU08 396 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 CENPTQ96BT3 561 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 KLHL32Q96NJ5 620 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 EFHD1Q9BUP0 239 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 WRAP53Q9BUR4 548 aaKnown RBP9.43□□□□□ -0.9
PTPN12-216ENST00000523952 OSBPL1AQ9BXW6 950 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 SLC4A5Q9BY07 1137 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 TKTL2Q9H0I9 626 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 SEMA6CQ9H3T2 930 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 DPEP2Q9H4A9 486 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 SYNCQ9H7C4 482 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 GPN2Q9H9Y4 310 aaPredicted RBP9.43□□□□□ -0.9
PTPN12-216ENST00000523952 METTL14Q9HCE5 456 aaKnown RBP9.43□□□□□ -0.9
PTPN12-216ENST00000523952 MPP6Q9NZW5 540 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 APPL1Q9UKG1 709 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 SRPK3Q9UPE1 567 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 FCF1Q9Y324 198 aaKnown RBP9.43□□□□□ -0.9
PTPN12-216ENST00000523952 GTF3C3Q9Y5Q9 886 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 CRYBG3Q68DQ2 2970 aa9.43□□□□□ -0.9
PTPN12-216ENST00000523952 PRR19A6NJB7 356 aa9.42□□□□□ -0.9
PTPN12-216ENST00000523952 EFCAB7A8K855 629 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms