RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	PPP1R35	Q8TAP8	253 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	SPATA20	Q8TB22	786 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	ANKRD49	Q8WVL7	239 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	RUFY2	Q8WXA3	655 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	TNPO1	Q92973	898 aa	Known RBP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	ARHGEF2	Q92974	986 aa	Known RBP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	SPATA17	Q96L03	361 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	DIRC2	Q96SL1	478 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	TMEM120A	Q9BXJ8	343 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	KRTAP9-2	Q9BYQ4	174 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	LRRCC1	Q9C099	1032 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	TSPYL1	Q9H0U9	437 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	BHMT2	Q9H2M3	363 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	PCIF1	Q9H4Z3	704 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	JMJD4	Q9H9V9	463 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	EMC7	Q9NPA0	242 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	CD93	Q9NPY3	652 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	ASCL3	Q9NQ33	180 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	RIC8B	Q9NVN3	520 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	CHCHD3	Q9NX63	227 aa	Known RBP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	CFAP45	Q9UL16	551 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	TBX20	Q9UMR3	447 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	ZNF711	Q9Y462	761 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	PRKDC	P78527	4128 aa	Known RBP	5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	MYOF	Q9NZM1	2061 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636	NUMA1	Q14980	2115 aa		5.36	□□□□□ -1.55
PABPC1-223	ENST00000523636		A0A087X0M5	115 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636		A0A1B0GX30	115 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636		A0A1W2PNU3	283 aa	Predicted RBP	5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636		F5H0A9	414 aa	Predicted RBP	5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	ACOT7	O00154	380 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	DVL2	O14641	736 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	SPTLC2	O15270	562 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	FLRT2	O43155	660 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	SLC7A4	O43246	635 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	XPOT	O43592	962 aa	Known RBP	5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	DOK2	O60496	412 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	STAM2	O75886	525 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	SEC24A	O95486	1093 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	LRG1	P02750	347 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	TOP1	P11387	765 aa	Known RBP	5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	CKMT1A	P12532	417 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	PFKL	P17858	780 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	OR1D2	P34982	312 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	DPP6	P42658	865 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	CLCN2	P51788	898 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	PDE1A	P54750	535 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	GRIN1	Q05586	938 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	DNAJC3	Q13217	504 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	SRSF6	Q13247	344 aa	Known RBP	5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	POSTN	Q15063	836 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	RASA2	Q15283	850 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	SEC23A	Q15436	765 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	PSMD5	Q16401	504 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	MLANA	Q16655	118 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	CR1L	Q2VPA4	569 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	ITPRIPL2	Q3MIP1	535 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	CPZ	Q66K79	652 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	PGM2L1	Q6PCE3	622 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	TEPP	Q6URK8	271 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	ZER1	Q7Z7L7	766 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	ZZZ3	Q8IYH5	903 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	CACNA2D3	Q8IZS8	1091 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	TRIML1	Q8N9V2	468 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	ZMIZ2	Q8NF64	920 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	IPMK	Q8NFU5	416 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	UTP15	Q8TED0	518 aa	Known RBP	5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	SSC4D	Q8WTU2	575 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	MZB1	Q8WU39	189 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	KCNE4	Q8WWG9	221 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	AHCYL2	Q96HN2	611 aa	Known RBP	5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	C2orf40	Q9H1Z8	148 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	GAREM1	Q9H706	876 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	CNTD2	Q9H8S5	307 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	DMRT3	Q9NQL9	472 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	PAPOLB	Q9NRJ5	636 aa	Known RBP	5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	SPTLC3	Q9NUV7	552 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	ADAM28	Q9UKQ2	775 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	C19orf53	Q9UNZ5	99 aa	Predicted RBP	5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	C2CD2	Q9Y426	696 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	PCDHB1	Q9Y5F3	818 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	PCDHGB5	Q9Y5G0	923 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	PCDHGB2	Q9Y5G2	931 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	PCDHA5	Q9Y5H7	936 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	SLCO1B1	Q9Y6L6	691 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	TLN2	Q9Y4G6	2542 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	PKDREJ	Q9NTG1	2253 aa		5.35	□□□□□ -1.55
PABPC1-223	ENST00000523636	OBSL1	O75147	1896 aa		5.34	□□□□□ -1.55
PABPC1-223	ENST00000523636	COL1A2	P08123	1366 aa		5.34	□□□□□ -1.55
PABPC1-223	ENST00000523636	PHLPP2	Q6ZVD8	1323 aa		5.34	□□□□□ -1.55
PABPC1-223	ENST00000523636	PGPEP1L	A6NFU8	196 aa		5.34	□□□□□ -1.55
PABPC1-223	ENST00000523636	CCDC69	A6NI79	296 aa		5.34	□□□□□ -1.55
PABPC1-223	ENST00000523636		K7EQS6	105 aa		5.34	□□□□□ -1.55
PABPC1-223	ENST00000523636	SURF6	O75683	361 aa	Known RBP	5.34	□□□□□ -1.55
PABPC1-223	ENST00000523636	URI1	O94763	535 aa	Predicted RBP	5.34	□□□□□ -1.55
PABPC1-223	ENST00000523636	ADRB2	P07550	413 aa		5.34	□□□□□ -1.55
PABPC1-223	ENST00000523636	GZMA	P12544	262 aa		5.34	□□□□□ -1.55
PABPC1-223	ENST00000523636	XRCC6	P12956	609 aa	Known RBP eCLIP	5.34	□□□□□ -1.55

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