RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 LACRTQ9GZZ8 138 aa9.57□□□□□ -0.88
CLK4-209ENST00000521621 GRID2IPA4D2P6 1211 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 PCDHGA12O60330 932 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 ENGP17813 658 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 NOP2P46087 812 aaKnown RBP9.56□□□□□ -0.88
CLK4-209ENST00000521621 FOXK2Q01167 660 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 KYAT3Q6YP21 454 aaKnown RBP9.56□□□□□ -0.88
CLK4-209ENST00000521621 ARHGAP36Q6ZRI8 547 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 KLHDC8BQ8IXV7 354 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 OR14C36Q8NHC7 312 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 KIAA1524Q8TCG1 905 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 HES6Q96HZ4 224 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 MCCC1Q96RQ3 725 aaPredicted RBP9.56□□□□□ -0.88
CLK4-209ENST00000521621 LYSMD1Q96S90 227 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 SRPK1Q96SB4 655 aaKnown RBP9.56□□□□□ -0.88
CLK4-209ENST00000521621 C19orf43Q9BQ61 176 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 MAK16Q9BXY0 300 aaKnown RBP9.56□□□□□ -0.88
CLK4-209ENST00000521621 POLR1EQ9GZS1 481 aaKnown RBP9.56□□□□□ -0.88
CLK4-209ENST00000521621 ZDHHC6Q9H6R6 413 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 PHTF1Q9UMS5 762 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 CACNA1HO95180 2353 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 LRRD1A4D1F6 860 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 KPNA3O00505 521 aaPredicted RBP9.56□□□□□ -0.88
CLK4-209ENST00000521621 KRT86O43790 486 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 NRDCO43847 1150 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 CA4P22748 312 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 BNC1Q01954 994 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 SLC10A7Q0GE19 358 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 SLC10A2Q12908 348 aaPredicted RBP9.56□□□□□ -0.88
CLK4-209ENST00000521621 LPAL2Q16609 132 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 AASDHQ4L235 1098 aaPredicted RBP9.56□□□□□ -0.88
CLK4-209ENST00000521621 STPG1Q5TH74 334 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 FBXL19Q6PCT2 694 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 DAAM2Q86T65 1068 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 KIAA1328Q86T90 577 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 KIAA2013Q8IYS2 634 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 PGBD5Q8N414 524 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 PDLIM2Q96JY6 352 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 PPP1R2P1Q96PQ5 205 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 HINFPQ9BQA5 517 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 EDEM2Q9BV94 578 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 C1QTNF7Q9BXJ2 289 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 ZFR2Q9UPR6 939 aaKnown RBP9.56□□□□□ -0.88
CLK4-209ENST00000521621 ACTL7AQ9Y615 435 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 ANKRD36A6QL64 1941 aa9.56□□□□□ -0.88
CLK4-209ENST00000521621 GOLGA6L3A6NEY3 463 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 TMEM110-MUSTN1A8MSY1 372 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 APOC4-APOC2K7ER74 178 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 KRIT1O00522 736 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 INSIG1O15503 277 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 APOC2P02655 101 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 HNRNPA2B1P22626 353 aaKnown RBP9.55□□□□□ -0.88
CLK4-209ENST00000521621 CD38P28907 300 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 AKT2P31751 481 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 MMP12P39900 470 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 ABL2P42684 1182 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 SSR1P43307 286 aaKnown RBP9.55□□□□□ -0.88
CLK4-209ENST00000521621 METAP1P53582 386 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 RWDD2BP57060 319 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 YPEL5P62699 121 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 CCZ1BP86790 482 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 CCZ1P86791 482 aaPredicted RBP9.55□□□□□ -0.88
CLK4-209ENST00000521621 BCL2L1Q07817 233 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 ZNF235Q14590 738 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 ERAP2Q6P179 960 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 MFSD7Q6UXD7 560 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 GLRX5Q86SX6 157 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 ACRBPQ8NEB7 543 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 GANCQ8TET4 914 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 KLHL32Q96NJ5 620 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 EBF2Q9HAK2 575 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 EIF2B4Q9UI10 523 aaKnown RBP9.55□□□□□ -0.88
CLK4-209ENST00000521621 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.55□□□□□ -0.88
CLK4-209ENST00000521621 RNF103O00237 685 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 MUSKO15146 869 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 KRT10P13645 584 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 CCNB1P14635 433 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 CETN2P41208 172 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 NXPH1P58417 271 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 IRX4P78413 519 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 SF3A2Q15428 464 aaKnown RBP9.55□□□□□ -0.88
CLK4-209ENST00000521621 UGP2Q16851 508 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 RSPO4Q2I0M5 234 aaPredicted RBP9.55□□□□□ -0.88
CLK4-209ENST00000521621 ATXN7L2Q5T6C5 722 aaPredicted RBP9.55□□□□□ -0.88
CLK4-209ENST00000521621 UBL4BQ8N7F7 174 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 TSEN2Q8NCE0 465 aaKnown RBP9.55□□□□□ -0.88
CLK4-209ENST00000521621 BAHD1Q8TBE0 780 aaPredicted RBP9.55□□□□□ -0.88
CLK4-209ENST00000521621 ARRDC2Q8TBH0 407 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 DTX3LQ8TDB6 740 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 CENPTQ96BT3 561 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 AMFRQ9UKV5 643 aa9.55□□□□□ -0.88
CLK4-209ENST00000521621 CDV3Q9UKY7 258 aaKnown RBP9.55□□□□□ -0.88
CLK4-209ENST00000521621 OTOGLQ3ZCN5 2332 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 TBC1D3DA0A087WVF3 549 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 TBC1D3IA0A087WXS9 549 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 TBC1D3EA0A087X179 549 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 TBC1D3KA0A087X1G2 549 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 RGSL1A5PLK6 1076 aa9.54□□□□□ -0.88
CLK4-209ENST00000521621 TBC1D3FA6NER0 549 aaPredicted RBP9.54□□□□□ -0.88
CLK4-209ENST00000521621 TBC1D3LB9A6J9 549 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms