RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 PTPN20Q4JDL3 420 aa11.66□□□□□ -0.54
MRPS28-206ENST00000520946 LRRC73Q5JTD7 316 aa11.66□□□□□ -0.54
MRPS28-206ENST00000520946 TPRG1LQ5T0D9 272 aa11.66□□□□□ -0.54
MRPS28-206ENST00000520946 FOXR2Q6PJQ5 311 aa11.66□□□□□ -0.54
MRPS28-206ENST00000520946 GDPD4Q6W3E5 623 aa11.66□□□□□ -0.54
MRPS28-206ENST00000520946 ZNF574Q6ZN55 896 aaPredicted RBP11.66□□□□□ -0.54
MRPS28-206ENST00000520946 PLPP6Q8IY26 295 aa11.66□□□□□ -0.54
MRPS28-206ENST00000520946 OR2AP1Q8NGE2 309 aa11.66□□□□□ -0.54
MRPS28-206ENST00000520946 PCDH19Q8TAB3 1148 aa11.66□□□□□ -0.54
MRPS28-206ENST00000520946 ISG20Q96AZ6 181 aaKnown RBP11.66□□□□□ -0.54
MRPS28-206ENST00000520946 CENPTQ96BT3 561 aa11.66□□□□□ -0.54
MRPS28-206ENST00000520946 CMKLR1Q99788 373 aa11.66□□□□□ -0.54
MRPS28-206ENST00000520946 EPAS1Q99814 870 aa11.66□□□□□ -0.54
MRPS28-206ENST00000520946 WRAP53Q9BUR4 548 aaKnown RBP11.66□□□□□ -0.54
MRPS28-206ENST00000520946 LRRN3Q9H3W5 708 aa11.66□□□□□ -0.54
MRPS28-206ENST00000520946 TMPRSS4Q9NRS4 437 aa11.66□□□□□ -0.54
MRPS28-206ENST00000520946 GGT7Q9UJ14 662 aa11.66□□□□□ -0.54
MRPS28-206ENST00000520946 LOXL2Q9Y4K0 774 aa11.66□□□□□ -0.54
MRPS28-206ENST00000520946 IGLV3-10A0A075B6K4 115 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 FAM170AA1A519 330 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 CYSRT1A8MQ03 144 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 BECN2A8MW95 431 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 PPP1R3GB7ZBB8 358 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 D6RAR5 112 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 NTN3O00634 580 aaPredicted RBP11.65□□□□□ -0.54
MRPS28-206ENST00000520946 ZW10O43264 779 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 BUB1O43683 1085 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 PPFIA2O75334 1257 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 ZNF821O75541 412 aaPredicted RBP11.65□□□□□ -0.54
MRPS28-206ENST00000520946 GSRP00390 522 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 TNFP01375 233 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 TFE3P19532 575 aaPredicted RBP11.65□□□□□ -0.54
MRPS28-206ENST00000520946 IGFALSP35858 605 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 MTIF2P46199 727 aaKnown RBP11.65□□□□□ -0.54
MRPS28-206ENST00000520946 HK3P52790 923 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 MARSP56192 900 aaKnown RBP11.65□□□□□ -0.54
MRPS28-206ENST00000520946 ARF5P84085 180 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 LRRC14Q15048 493 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 PHF19Q5T6S3 580 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 LEKR1Q6ZMV7 388 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 B3GNT8Q7Z7M8 397 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 FAM131BQ86XD5 332 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 CCNJLQ8IV13 435 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 ZNF683Q8IZ20 524 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 KYQ8NBH2 561 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 SHC3Q92529 594 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 TSACCQ96A04 125 aaPredicted RBP11.65□□□□□ -0.54
MRPS28-206ENST00000520946 TMEM159Q96B96 161 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 PGAP3Q96FM1 320 aaPredicted RBP11.65□□□□□ -0.54
MRPS28-206ENST00000520946 GDAP1L1Q96MZ0 367 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 EDEM3Q9BZQ6 932 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 CLPBQ9H078 707 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 ANLNQ9NQW6 1124 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 KLQ9UEF7 1012 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 DNAI1Q9UI46 699 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 DNAJC12Q9UKB3 198 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 ACTL7AQ9Y615 435 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 KALRNO60229 2985 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 RP1P56715 2156 aa11.65□□□□□ -0.54
MRPS28-206ENST00000520946 NVLO15381 856 aaKnown RBP11.64□□□□□ -0.55
MRPS28-206ENST00000520946 RAMP2O60895 175 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 ZMPSTE24O75844 475 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 IGSF6O95976 241 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 ACVRL1P37023 503 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 PEX5P50542 639 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 SRP54P61011 504 aaKnown RBP11.64□□□□□ -0.55
MRPS28-206ENST00000520946 RHOAP61586 193 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 ATP11AP98196 1134 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 ELP6Q0PNE2 266 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 RAPGEF1Q13905 1077 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 KIF26BQ2KJY2 2108 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 LINC00303Q3SY05 128 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 ATXN7L2Q5T6C5 722 aaPredicted RBP11.64□□□□□ -0.55
MRPS28-206ENST00000520946 TAF8Q7Z7C8 310 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 VASH2Q86V25 355 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 SLC47A2Q86VL8 602 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 CFAP57Q96MR6 1250 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 MAGEH1Q9H213 219 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 MBNL1Q9NR56 388 aaKnown RBP11.64□□□□□ -0.55
MRPS28-206ENST00000520946 STARD5Q9NSY2 213 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 PPARGC1AQ9UBK2 798 aaKnown RBP11.64□□□□□ -0.55
MRPS28-206ENST00000520946 OR12D3Q9UGF7 316 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 MOSPD1Q9UJG1 213 aa11.64□□□□□ -0.55
MRPS28-206ENST00000520946 CXorf51AA0A1B0GTR3 108 aa11.63□□□□□ -0.55
MRPS28-206ENST00000520946 ZSCAN5CA6NGD5 496 aaPredicted RBP11.63□□□□□ -0.55
MRPS28-206ENST00000520946 FOXN3O00409 490 aaPredicted RBP11.63□□□□□ -0.55
MRPS28-206ENST00000520946 PES1O00541 588 aaKnown RBP11.63□□□□□ -0.55
MRPS28-206ENST00000520946 SUV39H1O43463 412 aa11.63□□□□□ -0.55
MRPS28-206ENST00000520946 CELA2BP08218 269 aaPredicted RBP11.63□□□□□ -0.55
MRPS28-206ENST00000520946 RHOQP17081 205 aa11.63□□□□□ -0.55
MRPS28-206ENST00000520946 ITIH1P19827 911 aa11.63□□□□□ -0.55
MRPS28-206ENST00000520946 PON1P27169 355 aa11.63□□□□□ -0.55
MRPS28-206ENST00000520946 CCKBRP32239 447 aa11.63□□□□□ -0.55
MRPS28-206ENST00000520946 SCNN1AP37088 669 aa11.63□□□□□ -0.55
MRPS28-206ENST00000520946 MAPKAPK2P49137 400 aa11.63□□□□□ -0.55
MRPS28-206ENST00000520946 PPM1FP49593 454 aaPredicted RBP11.63□□□□□ -0.55
MRPS28-206ENST00000520946 ATP1A2P50993 1020 aa11.63□□□□□ -0.55
MRPS28-206ENST00000520946 PDX1P52945 283 aa11.63□□□□□ -0.55
MRPS28-206ENST00000520946 APBA1Q02410 837 aa11.63□□□□□ -0.55
MRPS28-206ENST00000520946 IRF4Q15306 451 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms