RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 IFT43Q96FT9 208 aa14.29□□□□□ -0.12
SDC2-203ENST00000519587 RBM15Q96T37 977 aaKnown RBP eCLIP14.29□□□□□ -0.12
SDC2-203ENST00000519587 TRIM51Q9BSJ1 452 aa14.29□□□□□ -0.12
SDC2-203ENST00000519587 ADGRE3Q9BY15 652 aa14.29□□□□□ -0.12
SDC2-203ENST00000519587 RSPH9Q9H1X1 276 aaPredicted RBP14.29□□□□□ -0.12
SDC2-203ENST00000519587 MTG2Q9H4K7 406 aa14.29□□□□□ -0.12
SDC2-203ENST00000519587 EIF2B3Q9NR50 452 aaKnown RBP14.29□□□□□ -0.12
SDC2-203ENST00000519587 NEU2Q9Y3R4 380 aa14.29□□□□□ -0.12
SDC2-203ENST00000519587 SPTBN4Q9H254 2564 aa14.29□□□□□ -0.12
SDC2-203ENST00000519587 TCRBV21S2A2A0A5A6 115 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 EFCAB8A8MWE9 144 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 F5H423 210 aaPredicted RBP14.28□□□□□ -0.12
SDC2-203ENST00000519587 SMAPO00193 183 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 KPNA3O00505 521 aaPredicted RBP14.28□□□□□ -0.12
SDC2-203ENST00000519587 PMPCBO75439 489 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 LEFTY1O75610 366 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 IL1BP01584 269 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 UGT2B4P06133 528 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 APRTP07741 180 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 ZSCAN5DPP0CG00 497 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 PSMD8P48556 350 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 CCR3P51677 355 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 RPL26P61254 145 aaKnown RBP14.28□□□□□ -0.12
SDC2-203ENST00000519587 SKOR1P84550 965 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 CDK16Q00536 496 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 ZBTB16Q05516 673 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 TCF15Q12870 199 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 CALCOCO2Q13137 446 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 ARMC12Q5T9G4 340 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 NAPEPLDQ6IQ20 393 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 BRAT1Q6PJG6 821 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 GDPD4Q6W3E5 623 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 BMP8AQ7Z5Y6 402 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 LINC00523Q86TU6 105 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 NDUFAF2Q8N183 169 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 TAB3Q8N5C8 712 aaPredicted RBP14.28□□□□□ -0.12
SDC2-203ENST00000519587 CHST14Q8NCH0 376 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 TSTD1Q8NFU3 115 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 IPMKQ8NFU5 416 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 SPATA22Q8NHS9 363 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 PIP4K2CQ8TBX8 421 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 SNF8Q96H20 258 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 FEM1CQ96JP0 617 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 ERP44Q9BS26 406 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 ZFHX2Q9C0A1 2572 aaPredicted RBP14.28□□□□□ -0.12
SDC2-203ENST00000519587 BCCIPQ9P287 314 aaKnown RBP eCLIP14.28□□□□□ -0.12
SDC2-203ENST00000519587 SCML1Q9UN30 329 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 RPL26L1Q9UNX3 145 aaKnown RBP14.28□□□□□ -0.12
SDC2-203ENST00000519587 RAI2Q9Y5P3 530 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 WASF2Q9Y6W5 498 aa14.28□□□□□ -0.12
SDC2-203ENST00000519587 A0A1W2PQF6 199 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 ANTXRLA6NF34 631 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 AP3B1O00203 1094 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 HEXIM1O94992 359 aaKnown RBP14.27□□□□□ -0.13
SDC2-203ENST00000519587 METTL18O95568 372 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 APBB3O95704 486 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 AP2A1O95782 977 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 CPP00450 1065 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 DNTTP04053 509 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 DCNP07585 359 aaKnown RBP14.27□□□□□ -0.13
SDC2-203ENST00000519587 MMP2P08253 660 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 TPSB2P20231 275 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 C5AR1P21730 350 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 XPAP23025 273 aaPredicted RBP14.27□□□□□ -0.13
SDC2-203ENST00000519587 ITGB7P26010 798 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 EPHB1P54762 984 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 WNT3AP56704 352 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 POLR2LP62875 67 aaKnown RBP14.27□□□□□ -0.13
SDC2-203ENST00000519587 SARNPP82979 210 aaKnown RBP14.27□□□□□ -0.13
SDC2-203ENST00000519587 SATB1Q01826 763 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 FZD5Q13467 585 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 TPSAB1Q15661 275 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 CST6Q15828 149 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 PCSK7Q16549 785 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 ZNF805Q5CZA5 627 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 ARSIQ5FYB1 569 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 TEX35Q5T0J7 233 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 FAXCQ5TGI0 409 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 KIAA1211LQ6NV74 962 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 PKN3Q6P5Z2 889 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 PRUNE1Q86TP1 453 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 PRPF39Q86UA1 669 aaKnown RBP14.27□□□□□ -0.13
SDC2-203ENST00000519587 CAMK1DQ8IU85 385 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 MMAAQ8IVH4 418 aaKnown RBP14.27□□□□□ -0.13
SDC2-203ENST00000519587 PPIL6Q8IXY8 311 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 HCAR2Q8TDS4 363 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 PDCD6IPQ8WUM4 868 aaKnown RBP14.27□□□□□ -0.13
SDC2-203ENST00000519587 PRCCQ92733 491 aaPredicted RBP14.27□□□□□ -0.13
SDC2-203ENST00000519587 PBXIP1Q96AQ6 731 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 TADA1Q96BN2 335 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 OXNAD1Q96HP4 312 aaPredicted RBP14.27□□□□□ -0.13
SDC2-203ENST00000519587 FAM129BQ96TA1 746 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 TDRD1Q9BXT4 1180 aaKnown RBP14.27□□□□□ -0.13
SDC2-203ENST00000519587 SUV39H2Q9H5I1 410 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 ETNK1Q9HBU6 452 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 FAM86C1Q9NVL1 165 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 UBP1Q9NZI7 540 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 DKK3Q9UBP4 350 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 PPM1HQ9ULR3 514 aa14.27□□□□□ -0.13
SDC2-203ENST00000519587 SHOC2Q9UQ13 582 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms