RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 CHSY3Q70JA7 882 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 LINC00523Q86TU6 105 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 STON2Q8WXE9 905 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 BTBD9Q96Q07 612 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 HAPLN3Q96S86 360 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 CCDC28BQ9BUN5 200 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 POMKQ9H5K3 350 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 SPON1Q9HCB6 807 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 C6orf203Q9P0P8 240 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 CPA4Q9UI42 421 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 DTNAQ9Y4J8 743 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 TNFRSF10BO14763 440 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 SLC22A2O15244 555 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 IRAK2O43187 625 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 TCN1P20061 433 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 CHN2P52757 468 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 YBX1P67809 324 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 MYBPC1Q00872 1141 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 ZNF33AQ06730 810 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 NXNQ6DKJ4 435 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 C16orf89Q6UX73 402 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 IRGQQ8WZA9 623 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 FCRL2Q96LA5 508 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 NMUR1Q9HB89 426 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 RRN3Q9NYV6 651 aa8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 GMPR2Q9P2T1 348 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 AAR2Q9Y312 384 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-210ENST00000518825 CCL22O00626 93 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 GJB3O75712 270 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 WISP3O95389 354 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 HERC3Q15034 1050 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 TECRLQ5HYJ1 363 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 KDELC1Q6UW63 502 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 ATPAF2Q8N5M1 289 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 ICA1LQ8NDH6 482 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 OR13J1Q8NGT2 312 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 FAM110BQ8TC76 370 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 PDCD6IPQ8WUM4 868 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 RNF34Q969K3 372 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 SLCO4A1Q96BD0 722 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 ELMO2Q96JJ3 720 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 SH3GL3Q99963 347 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 PCDHAC1Q9H158 963 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 MRPL46Q9H2W6 279 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 CYP4F12Q9HCS2 524 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 CHST12Q9NRB3 414 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 CLIC5Q9NZA1 410 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 VTI1BQ9UEU0 232 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 FBXO5Q9UKT4 447 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 E7ENX8 843 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 VILLO15195 856 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 NPHS1O60500 1241 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 MMP2P08253 660 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 CTSHP09668 335 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 PMLP29590 882 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 HK2P52789 917 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 PLK1P53350 603 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 TIAL1Q01085 375 aaKnown RBP eCLIP8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 SATB1Q01826 763 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 LRP8Q14114 963 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 PTK2BQ14289 1009 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 CSHL1Q14406 222 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 PRPSAP1Q14558 356 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 C6orf52Q5T4I8 152 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 PTAR1Q7Z6K3 402 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 LDB1Q86U70 411 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 LCA5Q86VQ0 697 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 PCDH20Q8N6Y1 951 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 OCEL1Q9H607 264 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 ATP13A1Q9HD20 1204 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 RBM22Q9NW64 420 aaKnown RBP eCLIP8.53□□□□□ -1.041e-6■■■□□ 19.1
CTNNA1-210ENST00000518825 NSMCE4AQ9NXX6 385 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 HS3ST4Q9Y661 456 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 TANC1Q9C0D5 1861 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 LAMA2P24043 3122 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 A8MT66 165 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 TXNDC9O14530 226 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 KIF3CO14782 793 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 B4GALT3O60512 393 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 POMCP01189 267 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 CPB1P15086 417 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 ZNF26P17031 533 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 DNAJB1P25685 340 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 PRKAA2P54646 552 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 DNAJB13P59910 316 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 MRPS6P82932 125 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 PFKPQ01813 784 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 MAP2K5Q13163 448 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 RFTN1Q14699 578 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 RASIP1Q5U651 963 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 IL23RQ5VWK5 629 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 POTEHQ6S545 545 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 CCDC117Q8IWD4 279 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 SCML4Q8N228 414 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 ATP6V1E2Q96A05 226 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 TMA16Q96EY4 203 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 UBXN10Q96LJ8 280 aa8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 PRICKLE1Q96MT3 831 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-210ENST00000518825 MRPL57Q9BQC6 102 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms