RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 DNTTIP2Q5QJE6 756 aaKnown RBP3.86□□□□□ -1.79
VPS13B-207ENST00000518569 TXNDC8Q6A555 127 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 AWAT2Q6E213 333 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 DSTYKQ6XUX3 929 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 TRILQ7L0X0 811 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 MON1BQ7L1V2 547 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 ZNF367Q7RTV3 350 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 CTU1Q7Z7A3 348 aaKnown RBP3.86□□□□□ -1.79
VPS13B-207ENST00000518569 GPAT4Q86UL3 456 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 KLHL29Q96CT2 875 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 KIF1BPQ96EK5 621 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 C7orf26Q96N11 449 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 LBHD1Q9BQE6 289 aaPredicted RBP3.86□□□□□ -1.79
VPS13B-207ENST00000518569 MSTO1Q9BUK6 570 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 NPFFR1Q9GZQ6 430 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 LHPPQ9H008 270 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 PDCL3Q9H2J4 239 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 HIF1ANQ9NWT6 349 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 PLK2Q9NYY3 685 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 CARD8Q9Y2G2 431 aa3.86□□□□□ -1.79
VPS13B-207ENST00000518569 TYW5A2RUC4 315 aaKnown RBP3.85□□□□□ -1.79
VPS13B-207ENST00000518569 TTC36A6NLP5 189 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 BECN2A8MW95 431 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 KLRF2D3W0D1 207 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 I6L893 689 aaPredicted RBP3.85□□□□□ -1.79
VPS13B-207ENST00000518569 TNFRSF13BO14836 293 aaPredicted RBP3.85□□□□□ -1.79
VPS13B-207ENST00000518569 LDB2O43679 373 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 HOXB5P09067 269 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 UBL4AP11441 157 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 PSMA4P25789 261 aaKnown RBP3.85□□□□□ -1.79
VPS13B-207ENST00000518569 HOXD3P31249 432 aaPredicted RBP3.85□□□□□ -1.79
VPS13B-207ENST00000518569 CPOXP36551 454 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 CXCR3P49682 368 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 EIF3BP55884 814 aaKnown RBP3.85□□□□□ -1.79
VPS13B-207ENST00000518569 RUNX2Q13950 521 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 GSTA3Q16772 222 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 ZNF260Q3ZCT1 412 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 CPLX2Q6PUV4 134 aaKnown RBP3.85□□□□□ -1.79
VPS13B-207ENST00000518569 C9orf47Q6ZRZ4 202 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 Q6ZSV7 163 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 Q6ZTK2 550 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 R3HCC1LQ7Z5L2 792 aaKnown RBP3.85□□□□□ -1.79
VPS13B-207ENST00000518569 PALB2Q86YC2 1186 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 SFTPA2Q8IWL1 248 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 Q8N9P0 234 aaPredicted RBP3.85□□□□□ -1.79
VPS13B-207ENST00000518569 PPHLN1Q8NEY8 458 aaKnown RBP3.85□□□□□ -1.79
VPS13B-207ENST00000518569 KLHL15Q96M94 604 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 MPHOSPH8Q99549 860 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 H2AFJQ9BTM1 129 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 SF3B5Q9BWJ5 86 aaKnown RBP3.85□□□□□ -1.79
VPS13B-207ENST00000518569 A4GNTQ9UNA3 340 aa3.85□□□□□ -1.79
VPS13B-207ENST00000518569 A0A0U1RQF3 1178 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 OR6C75A6NL08 312 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 F5H0A9 414 aaPredicted RBP3.84□□□□□ -1.79
VPS13B-207ENST00000518569 ASAP2O43150 1006 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 RGS14O43566 566 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 MTA2O94776 668 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 MBD4O95243 580 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 CD4P01730 458 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 TFP02787 698 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 NAGAP17050 411 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 RFX5P48382 616 aaPredicted RBP3.84□□□□□ -1.79
VPS13B-207ENST00000518569 CLDN2P57739 230 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 KRTAP10-11P60412 298 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 TRAF1Q13077 416 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 CAPSQ13938 189 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 VEPH1Q14D04 833 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 RNPS1Q15287 305 aaKnown RBP3.84□□□□□ -1.79
VPS13B-207ENST00000518569 ZNF284Q2VY69 593 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 FSCBQ5H9T9 825 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 FNBP1LQ5T0N5 605 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 SLC46A3Q7Z3Q1 461 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 LURAP1LQ8IV03 231 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 KIAA2013Q8IYS2 634 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 PELI3Q8N2H9 469 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 APOLD1Q96LR9 279 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 SLC25A18Q9H1K4 315 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 PRKRIP1Q9H875 184 aaPredicted RBP3.84□□□□□ -1.79
VPS13B-207ENST00000518569 SMYD2Q9NRG4 433 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 IRAK4Q9NWZ3 460 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 FZD10Q9ULW2 581 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 CAMK2AQ9UQM7 478 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 SLC45A1Q9Y2W3 748 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 A3GALT2U3KPV4 340 aa3.84□□□□□ -1.79
VPS13B-207ENST00000518569 HSPB2A8KAH6 182 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 LIASO43766 372 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 SH3BP5O60239 455 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 WDHD1O75717 1129 aaPredicted RBP3.83□□□□□ -1.8
VPS13B-207ENST00000518569 SEC14L2O76054 403 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 RTN3O95197 1032 aaPredicted RBP3.83□□□□□ -1.8
VPS13B-207ENST00000518569 MT-CYBP00156 380 aaPredicted RBP3.83□□□□□ -1.8
VPS13B-207ENST00000518569 HOXC6P09630 235 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 TFPIP10646 304 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 CHATP28329 748 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 CDC25AP30304 524 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 ARRB2P32121 409 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 THPOP40225 353 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 CLCN5P51795 746 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 EFNA5P52803 228 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 POLGP54098 1239 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms