RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 ADRA1BP35368 520 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 ERFP50548 548 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 NEK3P51956 506 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 SLC18A1P54219 525 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 PDE1BQ01064 536 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 VEPH1Q14D04 833 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 KDELC2Q7Z4H8 507 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 NUDCD3Q8IVD9 361 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 GPR152Q8TDT2 470 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 AGAP11Q8TF27 550 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 MSANTD3Q96H12 275 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 TMEM209Q96SK2 561 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 PKMYT1Q99640 499 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 TMEM120AQ9BXJ8 343 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 TRIM4Q9C037 500 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 CCDC68Q9H2F9 335 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 FAM124BQ9H5Z6 455 aaPredicted RBP11.12□□□□□ -0.63
SPIDR-206ENST00000518074 ZFP14Q9HCL3 533 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 TXLNGQ9NUQ3 528 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 SYBUQ9NX95 663 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 PCDHB5Q9Y5E4 795 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 USP3Q9Y6I4 520 aa11.12□□□□□ -0.63
SPIDR-206ENST00000518074 DOCK6Q96HP0 2047 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 SDR42E2A6NKP2 422 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 PROB1E7EW31 1015 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 RFPL1O75677 317 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 OR4Q2P0C623 313 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 SAT1P21673 171 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 PCSK1P29120 753 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 EPHB2P29323 1055 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 CPA2P48052 419 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 SLC39A12Q504Y0 691 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 FAM78AQ5JUQ0 283 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 ARHGAP22Q7Z5H3 698 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 TTC7BQ86TV6 843 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 HS6ST3Q8IZP7 471 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 KIAA1958Q8N8K9 716 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 DTWD2Q8NBA8 298 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 ZMIZ2Q8NF64 920 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 SCAMP5Q8TAC9 235 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 SHKBP1Q8TBC3 707 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 AZIN2Q96A70 460 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 CRISPLD1Q9H336 500 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 TBC1D17Q9HA65 648 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 XAB2Q9HCS7 855 aaKnown RBP11.11□□□□□ -0.63
SPIDR-206ENST00000518074 DNAAF2Q9NVR5 837 aaKnown RBP11.11□□□□□ -0.63
SPIDR-206ENST00000518074 HMX2A2RU54 273 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 C1QAP02745 245 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 MYL2P10916 166 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 PRKCHP24723 683 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 DDX6P26196 483 aaKnown RBP eCLIP11.11□□□□□ -0.63
SPIDR-206ENST00000518074 CDC25CP30307 473 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 CCR2P41597 374 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 ETV4P43268 484 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 SLC18A2Q05940 514 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 PDK1Q15118 436 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 MLF2Q15773 248 aaPredicted RBP11.11□□□□□ -0.63
SPIDR-206ENST00000518074 ACCSLQ4AC99 568 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 ARHGAP15Q53QZ3 475 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 PPM1JQ5JR12 505 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 CCBE1Q6UXH8 406 aaPredicted RBP11.11□□□□□ -0.63
SPIDR-206ENST00000518074 RGS9BPQ6ZS82 235 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 DNAJB7Q7Z6W7 309 aaPredicted RBP11.11□□□□□ -0.63
SPIDR-206ENST00000518074 LONP2Q86WA8 852 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 ARID3BQ8IVW6 561 aaPredicted RBP11.11□□□□□ -0.63
SPIDR-206ENST00000518074 SMYD1Q8NB12 490 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 MCUQ8NE86 351 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 ING5Q8WYH8 240 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 TCEAL4Q96EI5 215 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 FUBP3Q96I24 572 aaKnown RBP eCLIP11.11□□□□□ -0.63
SPIDR-206ENST00000518074 FERMT1Q9BQL6 677 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 RPP25Q9BUL9 199 aaKnown RBP11.11□□□□□ -0.63
SPIDR-206ENST00000518074 TKTL2Q9H0I9 626 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 WDCPQ9H6R7 721 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 TXNDC16Q9P2K2 825 aa11.11□□□□□ -0.63
SPIDR-206ENST00000518074 NUP210Q8TEM1 1887 aaPredicted RBP11.11□□□□□ -0.63
SPIDR-206ENST00000518074 H0Y3Z8 333 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 TRDMT1O14717 391 aaKnown RBP11.1□□□□□ -0.63
SPIDR-206ENST00000518074 LTFP02788 710 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 MYL4P12829 197 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 TCF3P15923 654 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 TSHRP16473 764 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 MAGEA11P43364 429 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 SCNN1BP51168 640 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 PGGT1BP53609 377 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 DAOAP59103 153 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 RPL10AP62906 217 aaKnown RBP11.1□□□□□ -0.63
SPIDR-206ENST00000518074 BST1Q10588 318 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 SEMA5AQ13591 1074 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 MAPRE1Q15691 268 aaKnown RBP11.1□□□□□ -0.63
SPIDR-206ENST00000518074 SLC44A4Q53GD3 710 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 INTS6LQ5JSJ4 861 aaKnown RBP11.1□□□□□ -0.63
SPIDR-206ENST00000518074 SH2D5Q6ZV89 423 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 BZW1Q7L1Q6 419 aaKnown RBP11.1□□□□□ -0.63
SPIDR-206ENST00000518074 ALYREFQ86V81 257 aaKnown RBP11.1□□□□□ -0.63
SPIDR-206ENST00000518074 DCLK2Q8N568 766 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 NPWQ8N729 165 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 ATAD1Q8NBU5 361 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 MYLPFQ96A32 169 aa11.1□□□□□ -0.63
SPIDR-206ENST00000518074 OXNAD1Q96HP4 312 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms