RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 NEK5Q6P3R8 708 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 TMCO3Q6UWJ1 677 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 GCNT7Q6ZNI0 430 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 Q6ZSR6 202 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 SRLQ86TD4 932 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 ZSWIM9Q86XI8 627 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 EID2Q8N6I1 236 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 TMEM145Q8NBT3 493 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 KCTD6Q8NC69 237 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 PCDH19Q8TAB3 1148 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 CASKIN2Q8WXE0 1202 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 TSC1Q92574 1164 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 SKA1Q96BD8 255 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 BMFQ96LC9 184 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 EIF3CQ99613 913 aaKnown RBP11.63□□□□□ -0.55
VCAN-212ENST00000515397 CINPQ9BW66 212 aaPredicted RBP11.63□□□□□ -0.55
VCAN-212ENST00000515397 SCNM1Q9BWG6 230 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 SUV39H2Q9H5I1 410 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 DMTF1Q9Y222 760 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 TRPM6Q9BX84 2022 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 TMEM131Q92545 1883 aa11.63□□□□□ -0.55
VCAN-212ENST00000515397 MAP1BP46821 2468 aaKnown RBP11.63□□□□□ -0.55
VCAN-212ENST00000515397 AKAP13Q12802 2813 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 SPEGQ15772 3267 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 ITGAVP06756 1048 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 TMEM253P0C7T8 217 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 FTH1P19P0C7X4 201 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 ZNF883P0CG24 379 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 HNRNPA2B1P22626 353 aaKnown RBP11.62□□□□□ -0.55
VCAN-212ENST00000515397 ARSEP51690 589 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 ZNF75DP51815 510 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 MAXP61244 160 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 RPS21P63220 83 aaKnown RBP11.62□□□□□ -0.55
VCAN-212ENST00000515397 IL10RBQ08334 325 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 SGCGQ13326 291 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 DPYSL3Q14195 570 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 LBRQ14739 615 aaKnown RBP11.62□□□□□ -0.55
VCAN-212ENST00000515397 PTPRRQ15256 657 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 LLGL1Q15334 1064 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 SLC45A4Q5BKX6 768 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 TPRG1LQ5T0D9 272 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 SARM1Q6SZW1 724 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 DBX2Q6ZNG2 339 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 PTAR1Q7Z6K3 402 aaPredicted RBP11.62□□□□□ -0.55
VCAN-212ENST00000515397 PGBD5Q8N414 524 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 TC2NQ8N9U0 490 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 TEKT4Q8WW24 435 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 RAPGEF5Q92565 580 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 LRIG1Q96JA1 1093 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 PCDH12Q9NPG4 1184 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 MBNL1Q9NR56 388 aaKnown RBP11.62□□□□□ -0.55
VCAN-212ENST00000515397 DONSONQ9NYP3 566 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 UVRAGQ9P2Y5 699 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 KLK13Q9UKR3 277 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 WASF3Q9UPY6 502 aa11.62□□□□□ -0.55
VCAN-212ENST00000515397 IGF2RP11717 2491 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 CXorf51AA0A1B0GTR3 108 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 AREL1O15033 823 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 TSPAN6O43657 245 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 AP1G1O43747 822 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 MAFKO60675 156 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 PEX11BO96011 259 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 MYF5P13349 255 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 XPAP23025 273 aaPredicted RBP11.61□□□□□ -0.55
VCAN-212ENST00000515397 CLDN6P56747 220 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 ANKRD20A8PQ5CZ79 823 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 B4GALNT4Q76KP1 1039 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 CNGA4Q8IV77 575 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 SLC22A18ASQ8N1D0 253 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 PAF1Q8N7H5 531 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 SAP25Q8TEE9 199 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 KLF6Q99612 283 aaPredicted RBP11.61□□□□□ -0.55
VCAN-212ENST00000515397 C1QTNF2Q9BXJ5 285 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 OSBPL1AQ9BXW6 950 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 CPEB1Q9BZB8 566 aaKnown RBP11.61□□□□□ -0.55
VCAN-212ENST00000515397 GOLPH3Q9H4A6 298 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 UCKL1Q9NWZ5 548 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 PCDHGC4Q9Y5F7 938 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 PCDHGB2Q9Y5G2 931 aa11.61□□□□□ -0.55
VCAN-212ENST00000515397 GOLGA4Q13439 2230 aaKnown RBP11.61□□□□□ -0.55
VCAN-212ENST00000515397 TDRD6O60522 2096 aaKnown RBP11.6□□□□□ -0.55
VCAN-212ENST00000515397 A0A0U1RQS6 177 aa11.6□□□□□ -0.55
VCAN-212ENST00000515397 FLRT2O43155 660 aa11.6□□□□□ -0.55
VCAN-212ENST00000515397 MFSD11O43934 449 aa11.6□□□□□ -0.55
VCAN-212ENST00000515397 PCDHGA12O60330 932 aa11.6□□□□□ -0.55
VCAN-212ENST00000515397 KDELR1P24390 212 aa11.6□□□□□ -0.55
VCAN-212ENST00000515397 EPHA8P29322 1005 aaPredicted RBP11.6□□□□□ -0.55
VCAN-212ENST00000515397 NUDT1P36639 197 aa11.6□□□□□ -0.55
VCAN-212ENST00000515397 GRK6P43250 576 aa11.6□□□□□ -0.55
VCAN-212ENST00000515397 MAGEA1P43355 309 aa11.6□□□□□ -0.55
VCAN-212ENST00000515397 ZNF135P52742 658 aaPredicted RBP11.6□□□□□ -0.55
VCAN-212ENST00000515397 BCL2L1Q07817 233 aa11.6□□□□□ -0.55
VCAN-212ENST00000515397 SLC10A2Q12908 348 aaPredicted RBP11.6□□□□□ -0.55
VCAN-212ENST00000515397 DNAJC3Q13217 504 aa11.6□□□□□ -0.55
VCAN-212ENST00000515397 TCEA2Q15560 299 aa11.6□□□□□ -0.55
VCAN-212ENST00000515397 UGP2Q16851 508 aa11.6□□□□□ -0.55
VCAN-212ENST00000515397 CFAP58Q5T655 872 aa11.6□□□□□ -0.55
VCAN-212ENST00000515397 TMCO4Q5TGY1 634 aa11.6□□□□□ -0.55
VCAN-212ENST00000515397 NCBP2-AS2Q69YL0 99 aa11.6□□□□□ -0.55
VCAN-212ENST00000515397 KIAA1161Q6NSJ0 714 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms