RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 GAREM1Q9H706 876 aa11.66□□□□□ -0.54
SUB1-213ENST00000515355 ATP13A3Q9H7F0 1226 aa11.66□□□□□ -0.54
SUB1-213ENST00000515355 GRPEL1Q9HAV7 217 aa11.66□□□□□ -0.54
SUB1-213ENST00000515355 CAPN10Q9HC96 672 aa11.66□□□□□ -0.54
SUB1-213ENST00000515355 TRIM10Q9UDY6 481 aa11.66□□□□□ -0.54
SUB1-213ENST00000515355 GGT7Q9UJ14 662 aa11.66□□□□□ -0.54
SUB1-213ENST00000515355 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.66□□□□□ -0.54
SUB1-213ENST00000515355 A0A0U1RQJ8 604 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 IGLON5A6NGN9 336 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 A8MX80 341 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 CDX4O14627 284 aaPredicted RBP11.65□□□□□ -0.54
SUB1-213ENST00000515355 SLC30A4O14863 429 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 PSTPIP1O43586 416 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 OPHN1O60890 802 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 ZRANB2O95218 330 aaKnown RBP eCLIP11.65□□□□□ -0.54
SUB1-213ENST00000515355 PAK4O96013 591 aaPredicted RBP11.65□□□□□ -0.54
SUB1-213ENST00000515355 TIMP2P16035 220 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 MX2P20592 715 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 FECHP22830 423 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 CD38P28907 300 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 SERPINA4P29622 427 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 GARSP41250 739 aaKnown RBP11.65□□□□□ -0.54
SUB1-213ENST00000515355 ABL2P42684 1182 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 MARCKSL1P49006 195 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 RACK1P63244 317 aaKnown RBP11.65□□□□□ -0.54
SUB1-213ENST00000515355 FAM193AP78312 1265 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 AP1B1Q10567 949 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 SGCGQ13326 291 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 GRM3Q14832 879 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 PAFAH1B3Q15102 231 aaKnown RBP11.65□□□□□ -0.54
SUB1-213ENST00000515355 TCEAL1Q15170 157 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 IFI16Q16666 785 aaKnown RBP11.65□□□□□ -0.54
SUB1-213ENST00000515355 KIF19Q2TAC6 998 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 SLC45A4Q5BKX6 768 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 FAM182AQ5T1J6 154 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 CCDC181Q5TID7 509 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 HORMAD1Q86X24 394 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 TXLNBQ8N3L3 684 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 KIAA1524Q8TCG1 905 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 CXorf40AQ8TE69 158 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 SKA1Q96BD8 255 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 HAUS1Q96CS2 278 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 RTKNQ9BST9 563 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 HEMGNQ9BXL5 484 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 TMEM121BQ9BXQ6 578 aaPredicted RBP11.65□□□□□ -0.54
SUB1-213ENST00000515355 IL21RQ9HBE5 538 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 ANKRD6Q9Y2G4 727 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 FADS3Q9Y5Q0 445 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 SNX11Q9Y5W9 270 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 NUP205Q92621 2012 aa11.65□□□□□ -0.54
SUB1-213ENST00000515355 C3orf70A6NLC5 250 aaPredicted RBP11.64□□□□□ -0.55
SUB1-213ENST00000515355 SNPHO15079 494 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 NRDCO43847 1150 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 CST8O60676 142 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 MMP20O60882 483 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 JCHAINP01591 159 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 PTMAP06454 111 aaKnown RBP11.64□□□□□ -0.55
SUB1-213ENST00000515355 ZFXP17010 805 aaPredicted RBP11.64□□□□□ -0.55
SUB1-213ENST00000515355 AKT2P31751 481 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 HADHBP55084 474 aaKnown RBP11.64□□□□□ -0.55
SUB1-213ENST00000515355 CLDN2P57739 230 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 RPS21P63220 83 aaKnown RBP11.64□□□□□ -0.55
SUB1-213ENST00000515355 IL9RQ01113 521 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 GALNT2Q10471 571 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 SLC10A2Q12908 348 aaPredicted RBP11.64□□□□□ -0.55
SUB1-213ENST00000515355 HLA-BQ31612 363 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 TIGD7Q6NT04 549 aaPredicted RBP11.64□□□□□ -0.55
SUB1-213ENST00000515355 C11orf63Q6NUN7 778 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 SPOCD1Q6ZMY3 1216 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 TRIM69Q86WT6 500 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 LRRC49Q8IUZ0 686 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 RCOR2Q8IZ40 523 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 PGBD5Q8N414 524 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 C1orf216Q8TAB5 229 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 KRT35Q92764 455 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 FAF2Q96CS3 445 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 PSKH2Q96QS6 385 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 LGMNQ99538 433 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 SLC17A9Q9BYT1 436 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 CEP41Q9BYV8 373 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 CPEB1Q9BZB8 566 aaKnown RBP11.64□□□□□ -0.55
SUB1-213ENST00000515355 NOD2Q9HC29 1040 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 RBM22Q9NW64 420 aaKnown RBP eCLIP11.64□□□□□ -0.555e-8■■■□□ 16.2
SUB1-213ENST00000515355 DTLQ9NZJ0 730 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 SAE1Q9UBE0 346 aaPredicted RBP11.64□□□□□ -0.55
SUB1-213ENST00000515355 ZFR2Q9UPR6 939 aaKnown RBP11.64□□□□□ -0.55
SUB1-213ENST00000515355 PCDHGC4Q9Y5F7 938 aa11.64□□□□□ -0.55
SUB1-213ENST00000515355 CEP192Q8TEP8 1941 aa11.63□□□□□ -0.55
SUB1-213ENST00000515355 PLXND1Q9Y4D7 1925 aa11.63□□□□□ -0.55
SUB1-213ENST00000515355 PRAMEF26H0Y7S4 382 aa11.63□□□□□ -0.55
SUB1-213ENST00000515355 KCNK1O00180 336 aa11.63□□□□□ -0.55
SUB1-213ENST00000515355 MATN3O15232 486 aa11.63□□□□□ -0.55
SUB1-213ENST00000515355 TSPAN6O43657 245 aa11.63□□□□□ -0.55
SUB1-213ENST00000515355 CER1O95813 267 aa11.63□□□□□ -0.55
SUB1-213ENST00000515355 PEX11BO96011 259 aa11.63□□□□□ -0.55
SUB1-213ENST00000515355 WNT1P04628 370 aa11.63□□□□□ -0.55
SUB1-213ENST00000515355 CCNB1P14635 433 aa11.63□□□□□ -0.55
SUB1-213ENST00000515355 HNRNPA2B1P22626 353 aaKnown RBP11.63□□□□□ -0.55
SUB1-213ENST00000515355 CCNCP24863 283 aa11.63□□□□□ -0.55
SUB1-213ENST00000515355 HSPA9P38646 679 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms