RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 UCN2Q96RP3 112 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ERVMER34-1Q9H9K5 563 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ATP13A1Q9HD20 1204 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 HMX1Q9NP08 348 aaPredicted RBP7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 LGALS13Q9UHV8 139 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 TNFSF13BQ9Y275 285 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 DNAH12Q6ZR08 3092 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 KAT6AQ92794 2004 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 C15orf38-AP3S2A0A0A6YYH1 394 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 A0A1W2PQ72 361 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 FAM172BPA6NC97 362 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 NOP56O00567 594 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 DNALI1O14645 258 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 OAS1P00973 400 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 GH1P01241 217 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 GRK2P25098 689 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 GJA5P36382 358 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 NUDT1P36639 197 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 KCNJ5P48544 419 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 HCAR3P49019 387 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 CDH8P55286 799 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 KCNC4Q03721 635 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 ARHGAP1Q07960 439 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 ASPHQ12797 758 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 ORC1Q13415 861 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 TAZQ16635 292 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 TBRG1Q3YBR2 411 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 FUT11Q495W5 492 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 UBE2UQ5VVX9 321 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 DHRS4L2Q6PKH6 230 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 SLC4A11Q8NBS3 891 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 ADAMTS16Q8TE57 1224 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 CIDECQ96AQ7 238 aaPredicted RBP7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 PHF21AQ96BD5 680 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 DCPSQ96C86 337 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 BIRC8Q96P09 236 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 CPXM1Q96SM3 734 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 MMP19Q99542 508 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 C17orf62Q9BQA9 187 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 TBC1D10AQ9BXI6 508 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 RBM38Q9H0Z9 239 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 LHX5Q9H2C1 402 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 COQ3Q9NZJ6 369 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 ZNF236Q9UL36 1845 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 SYNDIG1LA6NDD5 238 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 TXNDC9O14530 226 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 SYNCRIPO60506 623 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 LRCH4O75427 683 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 PSMG1O95456 288 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 CPB1P15086 417 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 ATP6V1B1P15313 513 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 ACSL1P33121 698 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 SLC26A2P50443 739 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 PPIL2Q13356 520 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 AARS2Q5JTZ9 985 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 C1orf146Q5VVC0 180 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 KIAA1841Q6NSI8 718 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 ARHGAP11AQ6P4F7 1023 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 SULF1Q8IWU6 871 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 GALNT11Q8NCW6 608 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 LHFPL5Q8TAF8 219 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 AKAP1Q92667 903 aaKnown RBP eCLIP7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 CDCA5Q96FF9 252 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 C9orf72Q96LT7 481 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 EMILIN2Q9BXX0 1053 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 RHBGQ9H310 441 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 TRIM39Q9HCM9 518 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 FGFR1OP2Q9NVK5 253 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 DTLQ9NZJ0 730 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 BCAP29Q9UHQ4 241 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 PTBP2Q9UKA9 531 aaKnown RBP7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 ZNF175Q9Y473 711 aa7.55□□□□□ -1.2
PDLIM5-219ENST00000514743 ZNF98A6NK75 572 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TCP11X1B4DZS4 312 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TOR1BO14657 336 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 SHOXO15266 292 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 CSDE1O75534 798 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 SNAP29O95721 258 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 CD4P01730 458 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 ERBB2P04626 1255 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TXNP10599 105 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 MTM1Q13496 603 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 GRM2Q14416 872 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 PIGHQ14442 188 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 DMC1Q14565 340 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 FASTKD3Q14CZ7 662 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 FAM187BQ17R55 369 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TFDP3Q5H9I0 405 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 JADE1Q6IE81 842 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 ZNF425Q6IV72 752 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 PDE12Q6L8Q7 609 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 LPCAT2Q7L5N7 544 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 POLNQ7Z5Q5 900 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 DPP9Q86TI2 863 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 XYLT1Q86Y38 959 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 SCUBE3Q8IX30 993 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 FAM109AQ8N4B1 249 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TAB3Q8N5C8 712 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 SLC35B2Q8TB61 432 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 RAB3IL1Q8TBN0 382 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms