RNA–Protein interactions for RNA: ENST00000513161.1

NECAP2-212, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 5

Gene NECAP2, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-212ENST00000513161 CAMK1DQ8IU85 385 aa13.12□□□□□ -0.31
NECAP2-212ENST00000513161 RHOT2Q8IXI1 618 aa13.12□□□□□ -0.31
NECAP2-212ENST00000513161 BBS5Q8N3I7 341 aa13.12□□□□□ -0.31
NECAP2-212ENST00000513161 OXR1Q8N573 874 aa13.12□□□□□ -0.31
NECAP2-212ENST00000513161 ATPAF2Q8N5M1 289 aa13.12□□□□□ -0.31
NECAP2-212ENST00000513161 CDC6Q99741 560 aa13.12□□□□□ -0.31
NECAP2-212ENST00000513161 ATP13A3Q9H7F0 1226 aa13.12□□□□□ -0.31
NECAP2-212ENST00000513161 KLHL11Q9NVR0 708 aa13.12□□□□□ -0.31
NECAP2-212ENST00000513161 RCOR3Q9P2K3 495 aaPredicted RBP13.12□□□□□ -0.31
NECAP2-212ENST00000513161 SEPT3Q9UH03 358 aa13.12□□□□□ -0.31
NECAP2-212ENST00000513161 PCOLCE2Q9UKZ9 415 aa13.12□□□□□ -0.31
NECAP2-212ENST00000513161 ITM2BQ9Y287 266 aa13.12□□□□□ -0.31
NECAP2-212ENST00000513161 TP53BP1Q12888 1972 aaPredicted RBP13.11□□□□□ -0.31
NECAP2-212ENST00000513161 SHROOM3Q8TF72 1996 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 FPGTO14772 594 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 PCDHGA12O60330 932 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 MMP20O60882 483 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 TNNT1P13805 278 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 TIMP2P16035 220 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 SERPINA4P29622 427 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 ARHGAP25P42331 645 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 MAGEA1P43355 309 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 NOP2P46087 812 aaKnown RBP13.11□□□□□ -0.31
NECAP2-212ENST00000513161 TAS2R40P59535 323 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 BCL2L1Q07817 233 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 SLC10A7Q0GE19 358 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 PDK2Q15119 407 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 SPA17Q15506 151 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 TMEM259Q4ZIN3 620 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 CCDC157Q569K6 752 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 TMCO4Q5TGY1 634 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 ERAP2Q6P179 960 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 PTAR1Q7Z6K3 402 aaPredicted RBP13.11□□□□□ -0.31
NECAP2-212ENST00000513161 ZSCAN30Q86W11 494 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 SPATS2Q86XZ4 545 aaKnown RBP13.11□□□□□ -0.31
NECAP2-212ENST00000513161 CXorf40AQ8TE69 158 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 ZNF641Q96N77 438 aaPredicted RBP13.11□□□□□ -0.31
NECAP2-212ENST00000513161 ZNF599Q96NL3 588 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 TUBGCP5Q96RT8 1024 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 WRAP53Q9BUR4 548 aaKnown RBP13.11□□□□□ -0.31
NECAP2-212ENST00000513161 ERVMER34-1Q9H9K5 563 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 DKK3Q9UBP4 350 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 GGT7Q9UJ14 662 aa13.11□□□□□ -0.31
NECAP2-212ENST00000513161 TDRD6O60522 2096 aaKnown RBP13.11□□□□□ -0.31
NECAP2-212ENST00000513161 A6NNZ2 444 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 YKT6O15498 198 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 BUB1BO60566 1050 aaPredicted RBP13.1□□□□□ -0.31
NECAP2-212ENST00000513161 NEBLO76041 1014 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 TM7SF2O76062 418 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 ITIH2P19823 946 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 IL4RP24394 825 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 PMLP29590 882 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 MAN1A1P33908 653 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 RGRP47804 291 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 CSNK1DP48730 415 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 SUOXP51687 545 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 POLR2LP62875 67 aaKnown RBP13.1□□□□□ -0.31
NECAP2-212ENST00000513161 ITKQ08881 620 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 NSUN2Q08J23 767 aaKnown RBP eCLIP13.1□□□□□ -0.31
NECAP2-212ENST00000513161 ELP6Q0PNE2 266 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 DPYSL3Q14195 570 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 UGP2Q16851 508 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 ANKRD20A8PQ5CZ79 823 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 MARC1Q5VT66 337 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 BRAT1Q6PJG6 821 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 Q6ZSR6 202 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 PNPLA1Q8N8W4 532 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 TC2NQ8N9U0 490 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 TMEM145Q8NBT3 493 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 OR13H1Q8NG92 308 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 HCAR2Q8TDS4 363 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 RFFLQ8WZ73 363 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 TSC1Q92574 1164 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 PSKH2Q96QS6 385 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 C1QTNF7Q9BXJ2 289 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 C1QTNF2Q9BXJ5 285 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 MAK16Q9BXY0 300 aaKnown RBP13.1□□□□□ -0.31
NECAP2-212ENST00000513161 LUC7LQ9NQ29 371 aaKnown RBP13.1□□□□□ -0.31
NECAP2-212ENST00000513161 SCUBE2Q9NQ36 999 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 INTUQ9ULD6 942 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 APOBEC2Q9Y235 224 aaKnown RBP13.1□□□□□ -0.31
NECAP2-212ENST00000513161 BTBD3Q9Y2F9 522 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 HS3ST3A1Q9Y663 406 aa13.1□□□□□ -0.31
NECAP2-212ENST00000513161 TTC24A2A3L6 582 aaPredicted RBP13.09□□□□□ -0.31
NECAP2-212ENST00000513161 LRRD1A4D1F6 860 aa13.09□□□□□ -0.31
NECAP2-212ENST00000513161 AREL1O15033 823 aa13.09□□□□□ -0.31
NECAP2-212ENST00000513161 MAFKO60675 156 aa13.09□□□□□ -0.31
NECAP2-212ENST00000513161 CBFA2T3O75081 653 aa13.09□□□□□ -0.31
NECAP2-212ENST00000513161 TRIM16O95361 564 aa13.09□□□□□ -0.31
NECAP2-212ENST00000513161 CYLC1P35663 651 aaPredicted RBP13.09□□□□□ -0.31
NECAP2-212ENST00000513161 MMP13P45452 471 aa13.09□□□□□ -0.31
NECAP2-212ENST00000513161 AP1S1P61966 158 aa13.09□□□□□ -0.31
NECAP2-212ENST00000513161 BNIP3Q12983 259 aa13.09□□□□□ -0.31
NECAP2-212ENST00000513161 FGL2Q14314 439 aa13.09□□□□□ -0.31
NECAP2-212ENST00000513161 DBX2Q6ZNG2 339 aa13.09□□□□□ -0.31
NECAP2-212ENST00000513161 LRRC49Q8IUZ0 686 aa13.09□□□□□ -0.31
NECAP2-212ENST00000513161 EID2Q8N6I1 236 aa13.09□□□□□ -0.31
NECAP2-212ENST00000513161 PCDH19Q8TAB3 1148 aa13.09□□□□□ -0.31
NECAP2-212ENST00000513161 FAM174AQ8TBP5 190 aa13.09□□□□□ -0.31
NECAP2-212ENST00000513161 FAM71BQ8TC56 605 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms