RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 IGLON5A6NGN9 336 aa16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 TMEM110-MUSTN1A8MSY1 372 aa16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 PCDHGA12O60330 932 aa16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 RXRGP48443 463 aa16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 LBRQ14739 615 aaKnown RBP16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 GRM3Q14832 879 aa16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 PAFAH1B3Q15102 231 aaKnown RBP16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 KIAA1161Q6NSJ0 714 aa16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 LRRC49Q8IUZ0 686 aa16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 MAP7D3Q8IWC1 876 aa16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 PQLC3Q8N755 202 aa16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 FAF2Q96CS3 445 aa16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 KLHDC7BQ96G42 594 aa16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 PANX2Q96RD6 677 aa16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 ELF4Q99607 663 aaPredicted RBP16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 SEPT3Q9UH03 358 aa16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 GGT7Q9UJ14 662 aa16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 PCDHA13Q9Y5I0 950 aa16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 EPN1Q9Y6I3 576 aaPredicted RBP16.32■□□□□ 0.2
PDLIM5-216ENST00000511767 TPRP12270 2363 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 PLXNA2O75051 1894 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 SPAARA0A1B0GVQ0 90 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 TSPAN11A1L157 253 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 RAD51BO15315 384 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 MAGEC1O60732 1142 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 PIGNO95427 931 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 KCNA4P22459 653 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 HNRNPA2B1P22626 353 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 FECHP22830 423 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 RENBPP51606 427 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 SUOXP51687 545 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 SLC10A2Q12908 348 aaPredicted RBP16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 HNRNPDQ14103 355 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 TRIP6Q15654 476 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 UGP2Q16851 508 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 TMEM52BQ4KMG9 183 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 PGBD5Q8N414 524 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 RHBDD1Q8TEB9 315 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 SETD7Q8WTS6 366 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 RFFLQ8WZ73 363 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 LENG8Q96PV6 779 aaPredicted RBP16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 TUBGCP5Q96RT8 1024 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 KLF6Q99612 283 aaPredicted RBP16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 ZNF670Q9BS34 389 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 CINPQ9BW66 212 aaPredicted RBP16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 CALN1Q9BXU9 219 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 GDF3Q9NR23 364 aa16.31■□□□□ 0.2
PDLIM5-216ENST00000511767 TTC24A2A3L6 582 aaPredicted RBP16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 CR2P20023 1033 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 PMLP29590 882 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 AKT2P31751 481 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 SCNN1BP51168 640 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 HADHBP55084 474 aaKnown RBP16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 CLDN2P57739 230 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 BNIP3Q12983 259 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 SGCGQ13326 291 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 TMCO4Q5TGY1 634 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 LRRC38Q5VT99 294 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 NCBP2-AS2Q69YL0 99 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 ABI3BPQ7Z7G0 1075 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 ZSCAN30Q86W11 494 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 ZSWIM9Q86XI8 627 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 TMTC1Q8IUR5 882 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 NAXDQ8IW45 347 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 TEX26Q8N6G2 289 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 CENPTQ96BT3 561 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 ECHDC3Q96DC8 303 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 TSGA13Q96PP4 275 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 RNF157Q96PX1 679 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 FZD3Q9NPG1 666 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 KLHL11Q9NVR0 708 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 PCOLCE2Q9UKZ9 415 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 ITM2BQ9Y287 266 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 BTBD3Q9Y2F9 522 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 ALG6Q9Y672 507 aa16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 ARID1BQ8NFD5 2236 aaPredicted RBP16.3■□□□□ 0.2
PDLIM5-216ENST00000511767 POM121BA6NF01 834 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 C3orf70A6NLC5 250 aaPredicted RBP16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 NEMP1O14524 444 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 TRAFD1O14545 582 aaPredicted RBP16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 RIOK3O14730 519 aaKnown RBP16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 MMP20O60882 483 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 THEGLP0DJG4 465 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 SERPINB6P35237 376 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 GJC1P36383 396 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 SLC1A1P43005 524 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 SIM1P81133 766 aaPredicted RBP16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 GALNT2Q10471 571 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 LRRC73Q5JTD7 316 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 MARC1Q5VT66 337 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 BRAT1Q6PJG6 821 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 Q6ZSR6 202 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 FAM174AQ8TBP5 190 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 SAP25Q8TEE9 199 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 MYOCQ99972 504 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 TFR2Q9UP52 801 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 WASF3Q9UPY6 502 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 PCDHB9Q9Y5E1 797 aa16.29■□□□□ 0.2
PDLIM5-216ENST00000511767 ZNF487B1APH4 448 aa16.28■□□□□ 0.2
PDLIM5-216ENST00000511767 FLRT2O43155 660 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms