RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 ADAM7Q9H2U9 754 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 PRDM8Q9NQV8 689 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 DMGDHQ9UI17 866 aaKnown RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 C1orf232A0A0U1RR37 186 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 H3BUI4 141 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 XKRYO14609 159 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 TMCC2O75069 709 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 MICAL2O94851 1124 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 FSBPO95073 299 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 VARSP26640 1264 aaKnown RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 ABL2P42684 1182 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 DHPSP49366 369 aaPredicted RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 RPP38P78345 283 aaKnown RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 ILF3Q12906 894 aaKnown RBP eCLIP5.82□□□□□ -1.48
USP38-203ENST00000511739 RAPSNQ13702 412 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 SGCBQ16585 318 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 SPANXN3Q5MJ09 141 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 PRAMEF19Q5SWL8 479 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 ATXN7L2Q5T6C5 722 aaPredicted RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 FOXR2Q6PJQ5 311 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 OAFQ86UD1 273 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 SH2D3CQ8N5H7 860 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 MAB21L3Q8N8X9 362 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 ADCY4Q8NFM4 1077 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 ZNF473Q8WTR7 871 aaKnown RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 PMEPA1Q969W9 287 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 ITCHQ96J02 903 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 APBA2Q99767 749 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 GTPBP2Q9BX10 602 aaKnown RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 DSN1Q9H410 356 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 CDH7Q9ULB5 785 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 A0A087X0B3 334 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 ZSCAN5CA6NGD5 496 aaPredicted RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 SLC15A5A6NIM6 579 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 LACTBL1A8MY62 500 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 TRDMT1O14717 391 aaKnown RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 FGF10O15520 208 aaPredicted RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 CLEC3AO75596 197 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 GYPCP04921 128 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 SPATA31D3P0C874 917 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 SREBF1P36956 1147 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 TGFBR2P37173 567 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 GP5P40197 560 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 PSMD8P48556 350 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 HK2P52789 917 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 ATXN1P54253 815 aaKnown RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 AQP5P55064 265 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 DMTNQ08495 405 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 GRSF1Q12849 480 aaKnown RBP eCLIP5.82□□□□□ -1.48
USP38-203ENST00000511739 CCINQ13939 588 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 XKR6Q5GH73 641 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 PPP2R2DQ66LE6 453 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 RTL4Q6ZR62 310 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 SPATA31D4Q6ZUB0 917 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 SH3RF1Q7Z6J0 888 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 LIX1Q8N485 282 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 KIF2BQ8N4N8 673 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 GPR156Q8NFN8 814 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 MAGEE2Q8TD90 523 aaPredicted RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 SEMA4DQ92854 862 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 EXOC2Q96KP1 924 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 RNF145Q96MT1 663 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 KIAA1683Q9H0B3 1180 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 TBC1D14Q9P2M4 693 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 MGAT4AQ9UM21 535 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 TBC1D30Q9Y2I9 924 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 AP3M1Q9Y2T2 418 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 KCNK1O00180 336 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 ACKR2O00590 384 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 SNX4O95219 450 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 LDLRP01130 860 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 LGALS2P05162 132 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 EPHX1P07099 455 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 DBIP07108 87 aaKnown RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 ETS1P14921 441 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 IDSP22304 550 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 TCEA1P23193 301 aaKnown RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 BUD31P41223 144 aaPredicted RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 NR2C2P49116 596 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 RPIAP49247 311 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 FXR1P51114 621 aaKnown RBP eCLIP5.82□□□□□ -1.48
USP38-203ENST00000511739 DSG1Q02413 1049 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 USP4Q13107 963 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 FASTKQ14296 549 aaKnown RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 MYBPC2Q14324 1141 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 NR1D2Q14995 579 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 PGM5Q15124 567 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 ADRM1Q16186 407 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 BMT2Q1RMZ1 405 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 CCDC153Q494R4 210 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 KLHL12Q53G59 568 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 INO80DQ53TQ3 878 aaPredicted RBP5.82□□□□□ -1.48
USP38-203ENST00000511739 FKBP1CQ5VVH2 108 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 FAM91A1Q658Y4 838 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 CHSY3Q70JA7 882 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 OTOP2Q7RTS6 562 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 STK32CQ86UX6 486 aa5.82□□□□□ -1.48
USP38-203ENST00000511739 SCUBE3Q8IX30 993 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms