RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 HERC2P3Q9BVR0 1158 aa5.89□□□□□ -1.47
GYPB-212ENST00000511198 ACTRT3Q9BYD9 372 aa5.89□□□□□ -1.47
GYPB-212ENST00000511198 SIK2Q9H0K1 926 aa5.89□□□□□ -1.47
GYPB-212ENST00000511198 C8orf33Q9H7E9 229 aaPredicted RBP5.89□□□□□ -1.47
GYPB-212ENST00000511198 ZFP14Q9HCL3 533 aa5.89□□□□□ -1.47
GYPB-212ENST00000511198 RRAGDQ9NQL2 400 aaPredicted RBP5.89□□□□□ -1.47
GYPB-212ENST00000511198 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.89□□□□□ -1.47
GYPB-212ENST00000511198 DKK3Q9UBP4 350 aa5.89□□□□□ -1.47
GYPB-212ENST00000511198 PCDHA1Q9Y5I3 950 aa5.89□□□□□ -1.47
GYPB-212ENST00000511198 RAD54BQ9Y620 910 aa5.89□□□□□ -1.47
GYPB-212ENST00000511198 WDR19Q8NEZ3 1342 aa5.89□□□□□ -1.47
GYPB-212ENST00000511198 MED13Q9UHV7 2174 aa5.89□□□□□ -1.47
GYPB-212ENST00000511198 A0A0U1RQF3 1178 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 SMIM35A0A1B0GVV1 85 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 RRN3P2A6NIE6 340 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 GPD1P21695 349 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 TCF7P36402 384 aaPredicted RBP5.88□□□□□ -1.47
GYPB-212ENST00000511198 DGKEP52429 567 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 CLDN6P56747 220 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 SP4Q02446 784 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 PLCB4Q15147 1175 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 LONRF3Q496Y0 759 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 VPS53Q5VIR6 699 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 ERICH1Q86X53 443 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 KIAA0319LQ8IZA0 1049 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 HPS3Q969F9 1004 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 RSPRY1Q96DX4 576 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 MSANTD3Q96H12 275 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 NAF1Q96HR8 494 aaKnown RBP5.88□□□□□ -1.47
GYPB-212ENST00000511198 FNBP1Q96RU3 617 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 ALG8Q9BVK2 526 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 PRDM16Q9HAZ2 1276 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 KMT5AQ9NQR1 393 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 MARCH5Q9NX47 278 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 CHMP5Q9NZZ3 219 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 FBXW11Q9UKB1 542 aa5.88□□□□□ -1.47
GYPB-212ENST00000511198 GSTTP1A0A1W2PQM5 241 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 CGB1A6NKQ9 187 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 F8W810 466 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 M0QYG6 137 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 ATG13O75143 517 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 URI1O94763 535 aaPredicted RBP5.87□□□□□ -1.47
GYPB-212ENST00000511198 APBB3O95704 486 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 GNAI2P04899 355 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 ALDH2P05091 517 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 HSP90AA1P07900 732 aaKnown RBP5.87□□□□□ -1.47
GYPB-212ENST00000511198 TPM2P07951 284 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 CT47B1P0C2W7 299 aaPredicted RBP5.87□□□□□ -1.47
GYPB-212ENST00000511198 HSPD1P10809 573 aaKnown RBP5.87□□□□□ -1.47
GYPB-212ENST00000511198 HDCP19113 662 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 ITGALP20701 1170 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 PCSK6P29122 969 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 GLUD2P49448 558 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 PGM5Q15124 567 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 DUOXA1Q1HG43 343 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 CCDC96Q2M329 555 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 LINC00303Q3SY05 128 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 SBK1Q52WX2 424 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 PPM1LQ5SGD2 360 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 ODR4Q5SWX8 454 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 EMC10Q5UCC4 262 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 C1orf228Q6PIY5 440 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 DHRS13Q6UX07 377 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 RALGPS2Q86X27 583 aaPredicted RBP5.87□□□□□ -1.47
GYPB-212ENST00000511198 CSGALNACT1Q8TDX6 532 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 SETD7Q8WTS6 366 aaKnown RBP5.87□□□□□ -1.47
GYPB-212ENST00000511198 FKBP10Q96AY3 582 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 FAM136AQ96C01 138 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 HIC2Q96JB3 615 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 HAPLN3Q96S86 360 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 SERHLQ9NQF3 203 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 GTSE1Q9NYZ3 720 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 ERAP1Q9NZ08 941 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 STK39Q9UEW8 545 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 IP6K2Q9UHH9 426 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 SSX2IPQ9Y2D8 614 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 SLC4A4Q9Y6R1 1079 aa5.87□□□□□ -1.47
GYPB-212ENST00000511198 FN1P02751 2386 aaKnown RBP5.86□□□□□ -1.47
GYPB-212ENST00000511198 PLIN4Q96Q06 1357 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 GCOM1H8Y6P7 765 aaPredicted RBP5.86□□□□□ -1.47
GYPB-212ENST00000511198 NMT2O60551 498 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 OFD1O75665 1012 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 DNAJB5O75953 348 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 ABLIM3O94929 683 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 LUC7L3O95232 432 aaKnown RBP5.86□□□□□ -1.47
GYPB-212ENST00000511198 IGHDP01880 384 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 NR2F6P10588 404 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 PIM1P11309 404 aaPredicted RBP5.86□□□□□ -1.47
GYPB-212ENST00000511198 CD6P30203 668 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 CRYBB1P53674 252 aaPredicted RBP5.86□□□□□ -1.47
GYPB-212ENST00000511198 TFAP4Q01664 338 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 HNRNPA0Q13151 305 aaKnown RBP5.86□□□□□ -1.47
GYPB-212ENST00000511198 MTX1Q13505 466 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 NEDD9Q14511 834 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 FAM160B1Q5W0V3 765 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 MTHFD1LQ6UB35 978 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 AMIGO2Q86SJ2 522 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 MFSD6LQ8IWD5 586 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 FAM46DQ8NEK8 389 aa5.86□□□□□ -1.47
GYPB-212ENST00000511198 TCEAL4Q96EI5 215 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms