RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 GPAMQ9HCL2 828 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CUEDC1Q9NWM3 386 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 USP36Q9P275 1121 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 C5AR2Q9P296 337 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 IP6K2Q9UHH9 426 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 APPL1Q9UKG1 709 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 TTLL3Q9Y4R7 772 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 FRMPD3Q5JV73 1810 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ATXN2Q99700 1313 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SLC9B1P1A6NJY1 282 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 C21orf140B9A014 251 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ANKRD63C9JTQ0 380 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 MUSKO15146 869 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 MID1O15344 667 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 STX7O15400 261 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 FOXP2O15409 715 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 AKR1B10O60218 316 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SOCS5O75159 536 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 AVILO75366 819 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ZNF202O95125 648 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 NDUFA10O95299 355 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 RECKO95980 971 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 IGLV3-19P01714 112 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CKMT1AP12532 417 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 COX6B1P14854 86 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 HMGA1P17096 107 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ACTR1BP42025 376 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CARSP49589 748 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 RGS7P49802 495 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 EPHA4P54764 986 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 GALCP54803 685 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ADKP55263 362 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CDH6P55285 790 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 KIAA1024LP59773 190 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ACTR1AP61163 376 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PHEXP78562 749 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ZBED6P86452 979 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SOX4Q06945 474 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 DPYSQ14117 519 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 NFATC4Q14934 902 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CLCA4Q14CN2 919 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 TCTN1Q2MV58 587 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 C14orf28Q4W4Y0 310 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 MARC1Q5VT66 337 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 LRRC8EQ6NSJ5 796 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 C16orf46Q6P387 395 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 C6orf15Q6UXA7 325 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 Q6ZSR6 202 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SDCCAG8Q86SQ7 713 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 FAM26EQ8N5C1 309 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 DQX1Q8TE96 717 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 RIT1Q92963 219 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 TMEM125Q96AQ2 219 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 MAGED4Q96JG8 741 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PKNOX2Q96KN3 472 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 C1orf74Q96LT6 269 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 VAT1Q99536 393 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SEMA3CQ99985 751 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 C11orf70Q9BRQ4 267 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 GPR87Q9BY21 358 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 RBSNQ9H1K0 784 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SLC25A18Q9H1K4 315 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 LINC00597Q9H2U6 94 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PCMTD2Q9NV79 361 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 KBTBD4Q9NVX7 518 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PLK2Q9NYY3 685 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SAMD15Q9P1V8 674 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 HCSTQ9UBK5 93 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 RCOR1Q9UKL0 485 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SNX7Q9UNH6 387 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 LOXL2Q9Y4K0 774 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 DNMT3AQ9Y6K1 912 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ZSWIM8A7E2V4 1837 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 B4E171 279 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 H3BMM5 538 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 WNT9AO14904 365 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 KMOO15229 486 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 TOX3O15405 576 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 RAD1O60671 282 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 SIN3BO75182 1162 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CRTAMO95727 393 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 OLFM2O95897 454 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CCDC130P13994 396 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 CYP11B1P15538 503 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 GLB1P16278 677 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 ALDH4A1P30038 563 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 MAT2AP31153 395 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 FOXN2P32314 431 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 HSD17B2P37059 387 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 HADHAP40939 763 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 TSPAN7P41732 249 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 GEMP55040 296 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 DNM1Q05193 864 aaKnown RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 KCNMA1Q12791 1236 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 NFATC3Q12968 1075 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PDE1CQ14123 709 aaPredicted RBP2.87□□□□□ -1.95
CLOCK-209ENST00000511124 MAP7Q14244 749 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 PDK2Q15119 407 aa2.87□□□□□ -1.95
CLOCK-209ENST00000511124 STX1AQ16623 288 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms