RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CST5P28325 142 aaPredicted RBP7.16□□□□□ -1.26
USP53-206ENST00000510737 CDC25AP30304 524 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 VCPP55072 806 aaKnown RBP7.16□□□□□ -1.26
USP53-206ENST00000510737 COG2Q14746 738 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 ASIC2Q16515 512 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 TWISTNBQ3B726 338 aaPredicted RBP7.16□□□□□ -1.26
USP53-206ENST00000510737 PLEKHG6Q3KR16 790 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 ZNF474Q6S9Z5 364 aaPredicted RBP7.16□□□□□ -1.26
USP53-206ENST00000510737 DHRS13Q6UX07 377 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 HERC6Q8IVU3 1022 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 CLASRPQ8N2M8 674 aaKnown RBP7.16□□□□□ -1.26
USP53-206ENST00000510737 ANKRD44Q8N8A2 993 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 ABHD5Q8WTS1 349 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 NEUROG1Q92886 237 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 MROH8Q9H579 483 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 CDCP1Q9H5V8 836 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 BICC1Q9H694 974 aaKnown RBP7.16□□□□□ -1.26
USP53-206ENST00000510737 RPAP3Q9H6T3 665 aaPredicted RBP7.16□□□□□ -1.26
USP53-206ENST00000510737 RXFP3Q9NSD7 469 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 HOXC10Q9NYD6 342 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 GRIN2DO15399 1336 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 DMXL1Q9Y485 3027 aa7.16□□□□□ -1.26
USP53-206ENST00000510737 PTPRZ1P23471 2315 aaPredicted RBP7.16□□□□□ -1.26
USP53-206ENST00000510737 IFITM10A6NMD0 228 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 VSTM5A8MXK1 200 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 APAF1O14727 1248 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 DUSP11O75319 330 aaKnown RBP7.15□□□□□ -1.26
USP53-206ENST00000510737 GH2P01242 217 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 MATN1P21941 496 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 MST1P26927 711 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 AVPR2P30518 371 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 ACSM6Q6P461 480 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 ATG9AQ7Z3C6 839 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 DEFB128Q7Z7B8 93 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 LAS2Q8IYD9 372 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 FBXL14Q8N1E6 418 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 OR52L2PQ8NGH6 319 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 INPP5DQ92835 1189 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 BTBD1Q9H0C5 482 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 RBM38Q9H0Z9 239 aaKnown RBP7.15□□□□□ -1.26
USP53-206ENST00000510737 ZBTB26Q9HCK0 441 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 ROBO3Q96MS0 1386 aa7.15□□□□□ -1.26
USP53-206ENST00000510737 CHD6Q8TD26 2715 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 KIF28PB7ZC32 967 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 EYA2O00167 538 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 ENO1P06733 434 aaKnown RBP7.14□□□□□ -1.27
USP53-206ENST00000510737 RHCEP18577 417 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 ATRXP46100 2492 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 CALD1Q05682 793 aaKnown RBP7.14□□□□□ -1.27
USP53-206ENST00000510737 GBX1Q14549 363 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 TRIP12Q14669 1992 aaPredicted RBP7.14□□□□□ -1.27
USP53-206ENST00000510737 ZNF628Q5EBL2 1059 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 LIPMQ5VYY2 423 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 WDR87Q6ZQQ6 2873 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 EMSYQ7Z589 1322 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 TMCO2Q7Z6W1 182 aaPredicted RBP7.14□□□□□ -1.27
USP53-206ENST00000510737 SUGP1Q8IWZ8 645 aaKnown RBP7.14□□□□□ -1.27
USP53-206ENST00000510737 TEX11Q8IYF3 940 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 ZFPM2Q8WW38 1151 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 KAT2BQ92831 832 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 RMDN1Q96DB5 314 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 LMLNQ96KR4 655 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 WDR83Q9BRX9 315 aaKnown RBP7.14□□□□□ -1.27
USP53-206ENST00000510737 FSD1Q9BTV5 496 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 ELOVL1Q9BW60 279 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 PCGF6Q9BYE7 350 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 UPF3AQ9H1J1 476 aaKnown RBP7.14□□□□□ -1.27
USP53-206ENST00000510737 RALYQ9UKM9 306 aaKnown RBP7.14□□□□□ -1.27
USP53-206ENST00000510737 ZNF236Q9UL36 1845 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 MTUS1Q9ULD2 1270 aa7.14□□□□□ -1.27
USP53-206ENST00000510737 BRWD1Q9NSI6 2320 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 TECTAO75443 2155 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 EVPLQ92817 2033 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 ATAD5Q96QE3 1844 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 FRMPD2Q68DX3 1309 aaPredicted RBP7.13□□□□□ -1.27
USP53-206ENST00000510737 SLC3A2P08195 630 aaKnown RBP7.13□□□□□ -1.27
USP53-206ENST00000510737 RFPL3SP0C7P2 107 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 ADORA1P30542 326 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 NBL1P41271 181 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 RFX5P48382 616 aaPredicted RBP7.13□□□□□ -1.27
USP53-206ENST00000510737 BEX3Q00994 111 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 SEMA3BQ13214 749 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 ITGA7Q13683 1181 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 KIAA1755Q5JYT7 1200 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 C6orf10Q5SRN2 563 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 KLHDC7AQ5VTJ3 777 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 TATDN1Q6P1N9 297 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 CXCL17Q6UXB2 119 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 KIAA0408Q6ZU52 694 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 PIK3AP1Q6ZUJ8 805 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 TRAPPC11Q7Z392 1133 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 SPATA2LQ8IUW3 424 aaPredicted RBP7.13□□□□□ -1.27
USP53-206ENST00000510737 DDIASQ8IXT1 998 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 ADSSL1Q8N142 457 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 PHKBQ93100 1093 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 NSUN4Q96CB9 384 aaKnown RBP7.13□□□□□ -1.27
USP53-206ENST00000510737 LRRC46Q96FV0 321 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 GPR78Q96P69 363 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 MEIS3Q99687 375 aa7.13□□□□□ -1.27
USP53-206ENST00000510737 UNKQ9C0B0 810 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms