RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 MAGEC1O60732 1142 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 KRT1P04264 644 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 TBC1D3HP0C7X1 549 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 SERPINA4P29622 427 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 MMP13P45452 471 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 NUMBP49757 651 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 RPS21P63220 83 aaKnown RBP17.46■□□□□ 0.39
CLDND1-221ENST00000510541 IRX4P78413 519 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 GBE1Q04446 702 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 ELP6Q0PNE2 266 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 XRCC4Q13426 336 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 TEAD4Q15561 434 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 SETMARQ53H47 684 aaPredicted RBP17.46■□□□□ 0.39
CLDND1-221ENST00000510541 ATXN7L2Q5T6C5 722 aaPredicted RBP17.46■□□□□ 0.39
CLDND1-221ENST00000510541 TBC1D3GQ6DHY5 549 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 TBC1D3CQ6IPX1 549 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 BBS12Q6ZW61 710 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 PARS2Q7L3T8 475 aaKnown RBP17.46■□□□□ 0.39
CLDND1-221ENST00000510541 CACUL1Q86Y37 369 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 KIAA2013Q8IYS2 634 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 RGL4Q8IZJ4 473 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 TBC1D3Q8IZP1 549 aaPredicted RBP17.46■□□□□ 0.39
CLDND1-221ENST00000510541 TMEM145Q8NBT3 493 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 DENND6BQ8NEG7 585 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.46■□□□□ 0.39
CLDND1-221ENST00000510541 ERLEC1Q96DZ1 483 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 PDLIM2Q96JY6 352 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 IL12RB2Q99665 862 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 RTKNQ9BST9 563 aa17.46■□□□□ 0.39
CLDND1-221ENST00000510541 EIF2B4Q9UI10 523 aaKnown RBP17.46■□□□□ 0.39
CLDND1-221ENST00000510541 SPTBN4Q9H254 2564 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 hCG_1818297A0A087WSY0 165 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 PRAMEF26H0Y7S4 382 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 TM4SF5O14894 197 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 UGT2B4P06133 528 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 CCDC175P0C221 793 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 CCNB1P14635 433 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 NFKBIAP25963 317 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 CETN2P41208 172 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 RWDD2BP57060 319 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 CCZ1BP86790 482 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 CCZ1P86791 482 aaPredicted RBP17.45■□□□□ 0.38
CLDND1-221ENST00000510541 ZNF235Q14590 738 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 UGP2Q16851 508 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 ZNF284Q2VY69 593 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 TMEM52BQ4KMG9 183 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 ZFYVE27Q5T4F4 411 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 NAPEPLDQ6IQ20 393 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 MFSD2AQ8NA29 543 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 HES6Q96HZ4 224 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 KLHL32Q96NJ5 620 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 C1QTNF2Q9BXJ5 285 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 POLR1EQ9GZS1 481 aaKnown RBP17.45■□□□□ 0.38
CLDND1-221ENST00000510541 ERVMER34-1Q9H9K5 563 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 TM9SF3Q9HD45 589 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 KCTD5Q9NXV2 234 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 TFR2Q9UP52 801 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 ATP8A1Q9Y2Q0 1164 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 HS3ST3A1Q9Y663 406 aa17.45■□□□□ 0.38
CLDND1-221ENST00000510541 TRPM6Q9BX84 2022 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 A0A1W2PR77 199 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 HACD1B0YJ81 288 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 APOC4-APOC2K7ER74 178 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 RNF103O00237 685 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 CDX4O14627 284 aaPredicted RBP17.44■□□□□ 0.38
CLDND1-221ENST00000510541 MUSKO15146 869 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 GJB3O75712 270 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 FSBPO95073 299 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 APOC2P02655 101 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 GJC1P36383 396 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 RGRP47804 291 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 RPL26P61254 145 aaKnown RBP17.44■□□□□ 0.38
CLDND1-221ENST00000510541 BCL2L1Q07817 233 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 PUM1Q14671 1186 aaKnown RBP eCLIP17.44■□□□□ 0.38
CLDND1-221ENST00000510541 SLC45A4Q5BKX6 768 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 LEKR1Q6ZMV7 388 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 DCP2Q8IU60 420 aaKnown RBP17.44■□□□□ 0.38
CLDND1-221ENST00000510541 CCDC13Q8IYE1 715 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 UBL4BQ8N7F7 174 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 VAT1Q99536 393 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 TMEM9BQ9NQ34 198 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 KLHL11Q9NVR0 708 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 AMFRQ9UKV5 643 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 RPL26L1Q9UNX3 145 aaKnown RBP17.44■□□□□ 0.38
CLDND1-221ENST00000510541 PCDHGB2Q9Y5G2 931 aa17.44■□□□□ 0.38
CLDND1-221ENST00000510541 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.44■□□□□ 0.38
CLDND1-221ENST00000510541 INSIG1O15503 277 aa17.43■□□□□ 0.38
CLDND1-221ENST00000510541 TIMP2P16035 220 aa17.43■□□□□ 0.38
CLDND1-221ENST00000510541 PRKD1Q15139 912 aaPredicted RBP17.43■□□□□ 0.38
CLDND1-221ENST00000510541 SF3A2Q15428 464 aaKnown RBP17.43■□□□□ 0.38
CLDND1-221ENST00000510541 AASDHQ4L235 1098 aaPredicted RBP17.43■□□□□ 0.38
CLDND1-221ENST00000510541 DBX2Q6ZNG2 339 aa17.43■□□□□ 0.38
CLDND1-221ENST00000510541 ARMCX6Q7L4S7 300 aa17.43■□□□□ 0.38
CLDND1-221ENST00000510541 PEX26Q7Z412 305 aa17.43■□□□□ 0.38
CLDND1-221ENST00000510541 TTC7BQ86TV6 843 aa17.43■□□□□ 0.38
CLDND1-221ENST00000510541 PGBD5Q8N414 524 aa17.43■□□□□ 0.38
CLDND1-221ENST00000510541 RYBPQ8N488 228 aaPredicted RBP17.43■□□□□ 0.38
CLDND1-221ENST00000510541 KRT35Q92764 455 aa17.43■□□□□ 0.38
CLDND1-221ENST00000510541 RNF25Q96BH1 459 aaPredicted RBP17.43■□□□□ 0.38
CLDND1-221ENST00000510541 IFT43Q96FT9 208 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms