RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 CLDN6P56747 220 aa12.79□□□□□ -0.36
KDM3B-206ENST00000509468 TPI1P60174 286 aa12.79□□□□□ -0.36
KDM3B-206ENST00000509468 PFN3P60673 137 aa12.79□□□□□ -0.36
KDM3B-206ENST00000509468 ELP6Q0PNE2 266 aa12.79□□□□□ -0.36
KDM3B-206ENST00000509468 MAMLD1Q13495 774 aa12.79□□□□□ -0.36
KDM3B-206ENST00000509468 CYTH1Q15438 398 aa12.79□□□□□ -0.36
KDM3B-206ENST00000509468 ERMARDQ5T6L9 678 aa12.79□□□□□ -0.36
KDM3B-206ENST00000509468 DNAAF5Q86Y56 855 aa12.79□□□□□ -0.36
KDM3B-206ENST00000509468 TPCN2Q8NHX9 752 aa12.79□□□□□ -0.36
KDM3B-206ENST00000509468 GLMNQ92990 594 aa12.79□□□□□ -0.36
KDM3B-206ENST00000509468 DCBLD2Q96PD2 775 aa12.79□□□□□ -0.36
KDM3B-206ENST00000509468 IL12RB2Q99665 862 aa12.79□□□□□ -0.36
KDM3B-206ENST00000509468 NCAPGQ9BPX3 1015 aa12.79□□□□□ -0.36
KDM3B-206ENST00000509468 HSD3B7Q9H2F3 369 aa12.79□□□□□ -0.36
KDM3B-206ENST00000509468 RTN4Q9NQC3 1192 aaKnown RBP12.79□□□□□ -0.36
KDM3B-206ENST00000509468 SPASTQ9UBP0 616 aa12.79□□□□□ -0.36
KDM3B-206ENST00000509468 ARHGAP42A6NI28 874 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 TMEM110-MUSTN1A8MSY1 372 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 DAPK3O43293 454 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 AQP9O43315 295 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 MMP20O60882 483 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 NEBLO76041 1014 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 GZMAP12544 262 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 ATP1A3P13637 1013 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 PSMA2P25787 234 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 RPIAP49247 311 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 BLKP51451 505 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 TYRO3Q06418 890 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 TMEM52BQ4KMG9 183 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 CDCP2Q5VXM1 449 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 KDM7AQ6ZMT4 941 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 LSMEM2Q8N112 164 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 AOPEPQ8N6M6 819 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 ZNF548Q8NEK5 533 aaPredicted RBP12.78□□□□□ -0.36
KDM3B-206ENST00000509468 VOPP1Q96AW1 172 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 GRAMD1AQ96CP6 724 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 TBATAQ96M53 351 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 ZNF641Q96N77 438 aaPredicted RBP12.78□□□□□ -0.36
KDM3B-206ENST00000509468 DEPDC7Q96QD5 511 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 BPIFA3Q9BQP9 254 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 SLC13A1Q9BZW2 595 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 KLC2Q9H0B6 622 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 SUV39H2Q9H5I1 410 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 LRRC19Q9H756 370 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 UBA2Q9UBT2 640 aaPredicted RBP12.78□□□□□ -0.36
KDM3B-206ENST00000509468 KLF15Q9UIH9 416 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 GGT7Q9UJ14 662 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 ACACAQ13085 2346 aa12.78□□□□□ -0.36
KDM3B-206ENST00000509468 ITPR1Q14643 2758 aa12.77□□□□□ -0.36
KDM3B-206ENST00000509468 TMCO5BA8MYB1 307 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 EEF2KO00418 725 aaKnown RBP12.77□□□□□ -0.37
KDM3B-206ENST00000509468 TEX33O43247 280 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 SPINT1O43278 529 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 FTLP02792 175 aaPredicted RBP12.77□□□□□ -0.37
KDM3B-206ENST00000509468 EIF4A3P38919 411 aaKnown RBP12.77□□□□□ -0.37
KDM3B-206ENST00000509468 ABCG1P45844 678 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 CSNK1DP48730 415 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 PEX5P50542 639 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 ZNF135P52742 658 aaPredicted RBP12.77□□□□□ -0.37
KDM3B-206ENST00000509468 POLR2LP62875 67 aaKnown RBP12.77□□□□□ -0.37
KDM3B-206ENST00000509468 NSUN2Q08J23 767 aaKnown RBP eCLIP12.77□□□□□ -0.37
KDM3B-206ENST00000509468 LRRC14Q15048 493 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 ASIC2Q16515 512 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 UGP2Q16851 508 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 KLHL40Q2TBA0 621 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 ANO6Q4KMQ2 910 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 CFAP58Q5T655 872 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 FAXCQ5TGI0 409 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 PLEKHA7Q6IQ23 1121 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 ERAP2Q6P179 960 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 VPS36Q86VN1 386 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 PSTKQ8IV42 348 aaKnown RBP12.77□□□□□ -0.37
KDM3B-206ENST00000509468 IFI44Q8TCB0 444 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 MAPK15Q8TD08 544 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 LMX1AQ8TE12 382 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 TUBGCP5Q96RT8 1024 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 EDEM3Q9BZQ6 932 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 DHX35Q9H5Z1 703 aaKnown RBP12.77□□□□□ -0.37
KDM3B-206ENST00000509468 AIPL1Q9NZN9 384 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 AP4E1Q9UPM8 1137 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 ITM2BQ9Y287 266 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 LAMA5O15230 3695 aa12.77□□□□□ -0.37
KDM3B-206ENST00000509468 CPED1A4D0V7 1026 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 TMEM191CA6NGB0 347 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 INSIG1O15503 277 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 PRPSAP2O60256 369 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 BRINP1O60477 761 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 PRAMEF11O60813 436 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 PALMO75781 387 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 HOXB3P14651 431 aaPredicted RBP12.76□□□□□ -0.37
KDM3B-206ENST00000509468 HCAR3P49019 387 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 PAPOLAP51003 745 aaKnown RBP12.76□□□□□ -0.37
KDM3B-206ENST00000509468 ADKP55263 362 aaKnown RBP12.76□□□□□ -0.37
KDM3B-206ENST00000509468 OGDHQ02218 1023 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 PPARDQ03181 441 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 EIF2B5Q13144 721 aaKnown RBP12.76□□□□□ -0.37
KDM3B-206ENST00000509468 COL9A2Q14055 689 aaPredicted RBP12.76□□□□□ -0.37
KDM3B-206ENST00000509468 NR0B2Q15466 257 aa12.76□□□□□ -0.37
KDM3B-206ENST00000509468 SOWAHCQ53LP3 525 aaPredicted RBP12.76□□□□□ -0.37
KDM3B-206ENST00000509468 BRAT1Q6PJG6 821 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms