RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 NYNRINQ9P2P1 1898 aaKnown RBP16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 A0A1B0GTQ1 180 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 IGLON5A6NGN9 336 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 TMEM110-MUSTN1A8MSY1 372 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 PCDHGA12O60330 932 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 RXRGP48443 463 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 LBRQ14739 615 aaKnown RBP16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 GRM3Q14832 879 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 PAFAH1B3Q15102 231 aaKnown RBP16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 KIAA1161Q6NSJ0 714 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 LRRC49Q8IUZ0 686 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 MAP7D3Q8IWC1 876 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 PQLC3Q8N755 202 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 FAF2Q96CS3 445 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 KLHDC7BQ96G42 594 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 PANX2Q96RD6 677 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 ELF4Q99607 663 aaPredicted RBP16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 SEPT3Q9UH03 358 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 GGT7Q9UJ14 662 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 PCDHA13Q9Y5I0 950 aa16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 EPN1Q9Y6I3 576 aaPredicted RBP16.32■□□□□ 0.2
PDLIM5-212ENST00000509333 TPRP12270 2363 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 PLXNA2O75051 1894 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 SPAARA0A1B0GVQ0 90 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 TSPAN11A1L157 253 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 RAD51BO15315 384 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 MAGEC1O60732 1142 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 PIGNO95427 931 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 HNRNPA2B1P22626 353 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 FECHP22830 423 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 RENBPP51606 427 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 SUOXP51687 545 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 SLC10A2Q12908 348 aaPredicted RBP16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 HNRNPDQ14103 355 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 TRIP6Q15654 476 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 UGP2Q16851 508 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 TMEM52BQ4KMG9 183 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 PGBD5Q8N414 524 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 RHBDD1Q8TEB9 315 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 SETD7Q8WTS6 366 aaKnown RBP16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 RFFLQ8WZ73 363 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 LENG8Q96PV6 779 aaPredicted RBP16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 TUBGCP5Q96RT8 1024 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 KLF6Q99612 283 aaPredicted RBP16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 ZNF670Q9BS34 389 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 CINPQ9BW66 212 aaPredicted RBP16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 CALN1Q9BXU9 219 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 GDF3Q9NR23 364 aa16.31■□□□□ 0.2
PDLIM5-212ENST00000509333 TTC24A2A3L6 582 aaPredicted RBP16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 CR2P20023 1033 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 PMLP29590 882 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 AKT2P31751 481 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 SCNN1BP51168 640 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 HADHBP55084 474 aaKnown RBP16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 CLDN2P57739 230 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 BNIP3Q12983 259 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 SGCGQ13326 291 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 TMCO4Q5TGY1 634 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 LRRC38Q5VT99 294 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 NCBP2-AS2Q69YL0 99 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 ABI3BPQ7Z7G0 1075 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 ZSCAN30Q86W11 494 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 ZSWIM9Q86XI8 627 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 TMTC1Q8IUR5 882 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 NAXDQ8IW45 347 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 TEX26Q8N6G2 289 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 CENPTQ96BT3 561 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 ECHDC3Q96DC8 303 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 TSGA13Q96PP4 275 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 RNF157Q96PX1 679 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 FZD3Q9NPG1 666 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 KLHL11Q9NVR0 708 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 PCOLCE2Q9UKZ9 415 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 ITM2BQ9Y287 266 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 BTBD3Q9Y2F9 522 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 ALG6Q9Y672 507 aa16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 ARID1BQ8NFD5 2236 aaPredicted RBP16.3■□□□□ 0.2
PDLIM5-212ENST00000509333 POM121BA6NF01 834 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 C3orf70A6NLC5 250 aaPredicted RBP16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 NEMP1O14524 444 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 TRAFD1O14545 582 aaPredicted RBP16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 RIOK3O14730 519 aaKnown RBP16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 MMP20O60882 483 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 THEGLP0DJG4 465 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 SERPINB6P35237 376 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 GJC1P36383 396 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 SLC1A1P43005 524 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 SIM1P81133 766 aaPredicted RBP16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 GALNT2Q10471 571 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 LRRC73Q5JTD7 316 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 MARC1Q5VT66 337 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 BRAT1Q6PJG6 821 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 Q6ZSR6 202 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 FAM174AQ8TBP5 190 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 SAP25Q8TEE9 199 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 MYOCQ99972 504 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 TFR2Q9UP52 801 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 WASF3Q9UPY6 502 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 PCDHB9Q9Y5E1 797 aa16.29■□□□□ 0.2
PDLIM5-212ENST00000509333 ZNF487B1APH4 448 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms