RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 TNFAIP3P21580 790 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 EPHB2P29323 1055 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 PBX1P40424 430 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 RGRP47804 291 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 ZNF165P49910 485 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 PCBP4P57723 403 aaKnown RBP11.06□□□□□ -0.64
RNF4-212ENST00000509258 HNRNPKP61978 463 aaKnown RBP eCLIP11.06□□□□□ -0.64
RNF4-212ENST00000509258 RPS21P63220 83 aaKnown RBP11.06□□□□□ -0.64
RNF4-212ENST00000509258 MAPK8IP2Q13387 824 aaPredicted RBP11.06□□□□□ -0.64
RNF4-212ENST00000509258 CYTH1Q15438 398 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 ASIC2Q16515 512 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 MYLK3Q32MK0 819 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 EFHC2Q5JST6 749 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 HGSNATQ68CP4 663 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 KIAA1161Q6NSJ0 714 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 ARHGAP36Q6ZRI8 547 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 ABI3BPQ7Z7G0 1075 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 LUZP1Q86V48 1076 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 ZSWIM9Q86XI8 627 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 SPACA3Q8IXA5 215 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 RYBPQ8N488 228 aaPredicted RBP11.06□□□□□ -0.64
RNF4-212ENST00000509258 NPWQ8N729 165 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 ZNF248Q8NDW4 579 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 ISG20Q96AZ6 181 aaKnown RBP11.06□□□□□ -0.64
RNF4-212ENST00000509258 CELF6Q96J87 481 aaKnown RBP11.06□□□□□ -0.64
RNF4-212ENST00000509258 KLHL32Q96NJ5 620 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 DEPDC7Q96QD5 511 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 LGMNQ99538 433 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 SNRNP25Q9BV90 132 aaKnown RBP11.06□□□□□ -0.64
RNF4-212ENST00000509258 RETREG1Q9H6L5 497 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 LRRC19Q9H756 370 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 USP29Q9HBJ7 922 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 CBX8Q9HC52 389 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 NLGN3Q9NZ94 848 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 AIPL1Q9NZN9 384 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 KLF15Q9UIH9 416 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 MYO6Q9UM54 1294 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 RAI2Q9Y5P3 530 aa11.06□□□□□ -0.64
RNF4-212ENST00000509258 ZFC3H1O60293 1989 aaKnown RBP11.05□□□□□ -0.64
RNF4-212ENST00000509258 LY6G6EA0A0G2JKS1 128 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 CXorf51AA0A1B0GTR3 108 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 A0A1W2PQC6 194 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 TMEM191CA6NGB0 347 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 IGLON5A6NGN9 336 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 WASH4PA8MWX3 477 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 AREL1O15033 823 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 CASC3O15234 703 aaKnown RBP11.05□□□□□ -0.64
RNF4-212ENST00000509258 BUB1O43683 1085 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 OPA1O60313 960 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 PIGNO95427 931 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 PAK4O96013 591 aaPredicted RBP11.05□□□□□ -0.64
RNF4-212ENST00000509258 GSRP00390 522 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 FTLP02792 175 aaPredicted RBP11.05□□□□□ -0.64
RNF4-212ENST00000509258 IL1R2P27930 398 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 MIPP30301 263 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 PRKCIP41743 596 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 CCDC173Q0VFZ6 552 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 SERINC3Q13530 473 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 ZNF805Q5CZA5 627 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 CDCP2Q5VXM1 449 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 TXNRD3NBQ6F5E7 133 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 DCUN1D2Q6PH85 259 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 PTAR1Q7Z6K3 402 aaPredicted RBP11.05□□□□□ -0.64
RNF4-212ENST00000509258 CPNE8Q86YQ8 564 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 ARHGAP12Q8IWW6 846 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 PLPP6Q8IY26 295 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 LSMEM2Q8N112 164 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 UMODL1-AS1Q8N2C9 162 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 OR2AP1Q8NGE2 309 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 FUBP1Q96AE4 644 aaKnown RBP11.05□□□□□ -0.64
RNF4-212ENST00000509258 RAB7BQ96AH8 199 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 ARHGEF26Q96DR7 871 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 FEM1CQ96JP0 617 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 ZNF578Q96N58 590 aaPredicted RBP11.05□□□□□ -0.64
RNF4-212ENST00000509258 SLC17A9Q9BYT1 436 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 SLC39A8Q9C0K1 460 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 NCKIPSDQ9NZQ3 722 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 PCSK1NQ9UHG2 260 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 IPO11Q9UI26 975 aaKnown RBP11.05□□□□□ -0.64
RNF4-212ENST00000509258 HPCAL4Q9UM19 191 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 AP4E1Q9UPM8 1137 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 PCDHB1Q9Y5F3 818 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 HS3ST3A1Q9Y663 406 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 U3KQA8 63 aa11.05□□□□□ -0.64
RNF4-212ENST00000509258 ASH1LQ9NR48 2969 aaKnown RBP11.05□□□□□ -0.64
RNF4-212ENST00000509258 SCAMP1O15126 338 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 AP1G1O43747 822 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 BUB1BO60566 1050 aaPredicted RBP11.04□□□□□ -0.64
RNF4-212ENST00000509258 LRCH4O75427 683 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 NEBLO76041 1014 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 DXOO77932 396 aaKnown RBP11.04□□□□□ -0.64
RNF4-212ENST00000509258 PRKCGP05129 697 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 TIMP2P16035 220 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 DESP17661 470 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 PSMA2P25787 234 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 IGFALSP35858 605 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 RABIFP47224 123 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 UCNP55089 124 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 TMPRSS3P57727 454 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 TPI1P60174 286 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms