RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 PRAMEF11O60813 436 aa14.99□□□□□ -0.01
UBE2D3-228ENST00000508974 MMP20O60882 483 aa14.99□□□□□ -0.01
UBE2D3-228ENST00000508974 XPAP23025 273 aaPredicted RBP14.99□□□□□ -0.01
UBE2D3-228ENST00000508974 GJC1P36383 396 aa14.99□□□□□ -0.01
UBE2D3-228ENST00000508974 SSR1P43307 286 aaKnown RBP14.99□□□□□ -0.01
UBE2D3-228ENST00000508974 RGRP47804 291 aa14.99□□□□□ -0.01
UBE2D3-228ENST00000508974 RXRGP48443 463 aa14.99□□□□□ -0.01
UBE2D3-228ENST00000508974 SEMG2Q02383 582 aa14.99□□□□□ -0.01
UBE2D3-228ENST00000508974 SKOR2Q2VWA4 1001 aaPredicted RBP14.99□□□□□ -0.01
UBE2D3-228ENST00000508974 CCDC122Q5T0U0 273 aa14.99□□□□□ -0.01
UBE2D3-228ENST00000508974 TXNRD3NBQ6F5E7 133 aa14.99□□□□□ -0.01
UBE2D3-228ENST00000508974 ARHGAP12Q8IWW6 846 aa14.99□□□□□ -0.01
UBE2D3-228ENST00000508974 RAB7BQ96AH8 199 aa14.99□□□□□ -0.01
UBE2D3-228ENST00000508974 BMFQ96LC9 184 aa14.99□□□□□ -0.01
UBE2D3-228ENST00000508974 UCKL1Q9NWZ5 548 aa14.99□□□□□ -0.01
UBE2D3-228ENST00000508974 EIF3CLB5ME19 914 aaKnown RBP14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 H3BRJ5 948 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 FPGTO14772 594 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 PALMO75781 387 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 PRKCGP05129 697 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 AMPD1P23109 780 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 DPYSQ14117 519 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 CFAP58Q5T655 872 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 ALKBH5Q6P6C2 394 aaKnown RBP14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 KANSL1Q7Z3B3 1105 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 ABI3BPQ7Z7G0 1075 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 PAF1Q8N7H5 531 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 TSEN2Q8NCE0 465 aaKnown RBP14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 RNF214Q8ND24 703 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 CXorf40AQ8TE69 158 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 EIF3CQ99613 913 aaKnown RBP14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 CINPQ9BW66 212 aaPredicted RBP14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 ETNK2Q9NVF9 386 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 DNAJC28Q9NX36 388 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 DONSONQ9NYP3 566 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 IPO11Q9UI26 975 aaKnown RBP14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 COQ6Q9Y2Z9 468 aa14.98□□□□□ -0.01
UBE2D3-228ENST00000508974 TTC24A2A3L6 582 aaPredicted RBP14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 FAM221BA6H8Z2 402 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 AREL1O15033 823 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 TPM3P06753 285 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 RARAP10276 462 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 TIMP2P16035 220 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 DGKAP23743 735 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 PCK1P35558 622 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 EIF4A3P38919 411 aaKnown RBP14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 ARL4AP40617 200 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 PDE1CQ14123 709 aaPredicted RBP14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 PIGHQ14442 188 aaPredicted RBP14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 TPRG1LQ5T0D9 272 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 AFMIDQ63HM1 303 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 KYAT3Q6YP21 454 aaKnown RBP14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 CCNI2Q6ZMN8 369 aaPredicted RBP14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 CPNE8Q86YQ8 564 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 CAMK1DQ8IU85 385 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 PSTKQ8IV42 348 aaKnown RBP14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 SLC39A7Q92504 469 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 IQCDQ96DY2 449 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 KLF6Q99612 283 aaPredicted RBP14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 C1QTNF2Q9BXJ5 285 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 TSPY26PQ9H489 355 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 KLHL11Q9NVR0 708 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 IP6K2Q9UHH9 426 aa14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.97□□□□□ -0.01
UBE2D3-228ENST00000508974 MYLKQ15746 1914 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 ARID1BQ8NFD5 2236 aaPredicted RBP14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 TRIM38O00635 465 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 SIGLEC6O43699 453 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 BUB1BO60566 1050 aaPredicted RBP14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 RFPL3O75679 317 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 DKK1O94907 266 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 CYP1A2P05177 515 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 IGFALSP35858 605 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 ACADVLP49748 655 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 SLC25A11Q02978 314 aaKnown RBP14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 FZD2Q14332 565 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 KRT81Q14533 505 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 ACAP1Q15027 740 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 DPYSL2Q16555 572 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 TMCO3Q6UWJ1 677 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 TMPRSS7Q7RTY8 843 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 SRLQ86TD4 932 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 ZSWIM9Q86XI8 627 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 SLC25A45Q8N413 288 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 KDF1Q8NAX2 398 aaPredicted RBP14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 ZNF564Q8TBZ8 553 aaPredicted RBP14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 CSPG4P5Q96PW8 444 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 PACSIN1Q9BY11 444 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 CPEB1Q9BZB8 566 aaKnown RBP14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 SUV39H2Q9H5I1 410 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 PCDH18Q9HCL0 1135 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 CTTNBP2NLQ9P2B4 639 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 HS3ST3A1Q9Y663 406 aa14.96□□□□□ -0.01
UBE2D3-228ENST00000508974 FREM2Q5SZK8 3169 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 TMEM8BA6NDV4 472 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 MUSKO15146 869 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 CBFA2T2O43439 604 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 PIAS2O75928 621 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 NEBLO76041 1014 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 TM7SF2O76062 418 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms