RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 RPLP0P05388 317 aaKnown RBP9.53□□□□□ -0.88
NEDD9-211ENST00000508546 WT1P19544 449 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-211ENST00000508546 TNFRSF8P28908 595 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 OR1E1P30953 314 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 EIF4A3P38919 411 aaKnown RBP9.53□□□□□ -0.88
NEDD9-211ENST00000508546 CXCR3P49682 368 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 PEX5P50542 639 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 ARF5P84085 180 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 ZFP36L1Q07352 338 aaKnown RBP9.53□□□□□ -0.88
NEDD9-211ENST00000508546 PNOCQ13519 176 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 CLCA4Q14CN2 919 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 ZNF805Q5CZA5 627 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 ARTNQ5T4W7 220 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 OTUD1Q5VV17 481 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-211ENST00000508546 OLFML1Q6UWY5 402 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 C11orf57Q6ZUT1 292 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-211ENST00000508546 SLC26A9Q7LBE3 791 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 TFAP2DQ7Z6R9 452 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 WDTC1Q8N5D0 677 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 KYQ8NBH2 561 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 ZNF397Q8NF99 534 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-211ENST00000508546 OR7D4Q8NG98 312 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 PCDH19Q8TAB3 1148 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 ZNF564Q8TBZ8 553 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-211ENST00000508546 HTR3CQ8WXA8 447 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 PGAP3Q96FM1 320 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-211ENST00000508546 NPY6RQ99463 290 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 C1QTNF7Q9BXJ2 289 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 CPEB1Q9BZB8 566 aaKnown RBP9.53□□□□□ -0.88
NEDD9-211ENST00000508546 TKTL2Q9H0I9 626 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 GOLPH3LQ9H4A5 285 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 ZDHHC6Q9H6R6 413 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 WDCPQ9H6R7 721 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 ANLNQ9NQW6 1124 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 PIGVQ9NUD9 493 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 TMEM51Q9NW97 253 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 MPP6Q9NZW5 540 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 HECAQ9UBI9 543 aaPredicted RBP9.53□□□□□ -0.88
NEDD9-211ENST00000508546 GULP1Q9UBP9 304 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 ZNF212Q9UDV6 495 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 GGT7Q9UJ14 662 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 DOLKQ9UPQ8 538 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 LOXL2Q9Y4K0 774 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 PCDHB11Q9Y5F2 797 aa9.53□□□□□ -0.88
NEDD9-211ENST00000508546 NF1P21359 2839 aa9.52□□□□□ -0.88
NEDD9-211ENST00000508546 PRAMEF33A0A0G2JMD5 474 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 TMEM110-MUSTN1A8MSY1 372 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 PRAMEF10O60809 474 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 TM7SF2O76062 418 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 CD160O95971 181 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 F9P00740 461 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 HSP90AA1P07900 732 aaKnown RBP9.52□□□□□ -0.89
NEDD9-211ENST00000508546 CELA2BP08218 269 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-211ENST00000508546 PNLIPP16233 465 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 ITIH1P19827 911 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 ELAVL4P26378 380 aaKnown RBP9.52□□□□□ -0.89
NEDD9-211ENST00000508546 DNA2P51530 1060 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 HK3P52790 923 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 SLC6A3Q01959 620 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 CCDC40Q4G0X9 1142 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 ZNF787Q6DD87 383 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 FAM183BPQ6ZVS7 135 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 ENOSF1Q7L5Y1 443 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 VASH2Q86V25 355 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 VPS36Q86VN1 386 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 ZFAND4Q86XD8 727 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 GKN2Q86XP6 184 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 CCNJLQ8IV13 435 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 TP53I13Q8NBR0 393 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-211ENST00000508546 GPR156Q8NFN8 814 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 SPATA20Q8TB22 786 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 NT5C3BQ969T7 300 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 VOPP1Q96AW1 172 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 CMKLR1Q99788 373 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 SPON2Q9BUD6 331 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 OSBPL1AQ9BXW6 950 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 EDEM3Q9BZQ6 932 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 ATP13A1Q9HD20 1204 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 UBE2TQ9NPD8 197 aaPredicted RBP9.52□□□□□ -0.89
NEDD9-211ENST00000508546 ACP6Q9NPH0 428 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 MED13Q9UHV7 2174 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 TUBD1Q9UJT1 453 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 APPL1Q9UKG1 709 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 PCDHGC3Q9UN70 934 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 GPR34Q9UPC5 381 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 PLAAQ9Y263 795 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 ITM2BQ9Y287 266 aa9.52□□□□□ -0.89
NEDD9-211ENST00000508546 FCF1Q9Y324 198 aaKnown RBP9.52□□□□□ -0.89
NEDD9-211ENST00000508546 ADGRG4Q8IZF6 3080 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 C9orf172C9J069 976 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 PSMA7O14818 248 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 RASGRP1O95267 797 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 POP4O95707 220 aaKnown RBP9.51□□□□□ -0.89
NEDD9-211ENST00000508546 RNF224P0DH78 156 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 CTSEP14091 401 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 GLB1P16278 677 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 ETV5P41161 510 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 CASRP41180 1078 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 SNX16P57768 344 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 CYP4F2P78329 520 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms