RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 NEK3P51956 506 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 GEMP55040 296 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 MAXP61244 160 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 POLR2LP62875 67 aaKnown RBP10.36□□□□□ -0.75
HTT-204ENST00000508321 ITKQ08881 620 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 MPP3Q13368 585 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 DHX34Q14147 1143 aaKnown RBP10.36□□□□□ -0.75
HTT-204ENST00000508321 ANGPT1Q15389 498 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 ANKRD20A2Q5SQ80 823 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 ANKRD20A1Q5TYW2 823 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 ANKRD20A3Q5VUR7 823 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 ZC3H14Q6PJT7 736 aaKnown RBP10.36□□□□□ -0.75
HTT-204ENST00000508321 CCDC137Q6PK04 289 aaKnown RBP10.36□□□□□ -0.75
HTT-204ENST00000508321 GDPD4Q6W3E5 623 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 SYDE1Q6ZW31 735 aaPredicted RBP10.36□□□□□ -0.75
HTT-204ENST00000508321 GSTA5Q7RTV2 222 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 PID1Q7Z2X4 250 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 LONP2Q86WA8 852 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 NDUFAF2Q8N183 169 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 PGBD3Q8N328 593 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 CNTD1Q8N815 330 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 FAM71DQ8N9W8 422 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 CHST14Q8NCH0 376 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 MNS1Q8NEH6 495 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 ATL2Q8NHH9 583 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 ARRDC2Q8TBH0 407 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 ZNF592Q92610 1267 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 NELL1Q92832 810 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 ECHDC3Q96DC8 303 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 FAM129BQ96TA1 746 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 AP1M1Q9BXS5 423 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 TDRD1Q9BXT4 1180 aaKnown RBP10.36□□□□□ -0.75
HTT-204ENST00000508321 PCED1AQ9H1Q7 454 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 KDM4CQ9H3R0 1056 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 MTG2Q9H4K7 406 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 NOD2Q9HC29 1040 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 PCYOX1Q9UHG3 505 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 EVLQ9UI08 416 aaPredicted RBP10.36□□□□□ -0.75
HTT-204ENST00000508321 AAR2Q9Y312 384 aaKnown RBP10.36□□□□□ -0.75
HTT-204ENST00000508321 PCDHGA2Q9Y5H1 932 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 MRFAP1Q9Y605 127 aa10.36□□□□□ -0.75
HTT-204ENST00000508321 SPAG17Q6Q759 2223 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 TRAFD1O14545 582 aaPredicted RBP10.35□□□□□ -0.75
HTT-204ENST00000508321 NDC80O14777 642 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 MID1O15344 667 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 AP1G1O43747 822 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 URI1O94763 535 aaPredicted RBP10.35□□□□□ -0.75
HTT-204ENST00000508321 IFNB1P01574 187 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 NFKB1P19838 968 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 COILP38432 576 aaPredicted RBP10.35□□□□□ -0.75
HTT-204ENST00000508321 CD86P42081 329 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 GRIA4P48058 902 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 GDF10P55107 478 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 DSC2Q02487 901 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 ELP6Q0PNE2 266 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 SNX1Q13596 522 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 PARP6Q2NL67 630 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 USP39Q53GS9 565 aaKnown RBP10.35□□□□□ -0.75
HTT-204ENST00000508321 ARSIQ5FYB1 569 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 ARMC12Q5T9G4 340 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 SLC36A4Q6YBV0 504 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 ERN2Q76MJ5 926 aaKnown RBP10.35□□□□□ -0.75
HTT-204ENST00000508321 KLHDC8BQ8IXV7 354 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 MAML2Q8IZL2 1156 aaPredicted RBP10.35□□□□□ -0.75
HTT-204ENST00000508321 PAF1Q8N7H5 531 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 OR6K2Q8NGY2 324 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 LRRN4Q8WUT4 740 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 TADA1Q96BN2 335 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 FEM1CQ96JP0 617 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 SRPK1Q96SB4 655 aaKnown RBP10.35□□□□□ -0.75
HTT-204ENST00000508321 OMDQ99983 421 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 FSD1LQ9BXM9 530 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 ADGRE3Q9BY15 652 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 CEP41Q9BYV8 373 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 SUV39H2Q9H5I1 410 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 SGK2Q9HBY8 427 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 ITM2CQ9NQX7 267 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 EIF2B3Q9NR50 452 aaKnown RBP10.35□□□□□ -0.75
HTT-204ENST00000508321 C2orf42Q9NWW7 574 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 ZSCAN32Q9NX65 697 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 FAM153AQ9UHL3 310 aa10.35□□□□□ -0.75
HTT-204ENST00000508321 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.34□□□□□ -0.75
HTT-204ENST00000508321 UPK3BL1B0FP48 263 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 UPK3BL2E5RIL1 263 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 PSMD3O43242 534 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 PLRG1O43660 514 aaKnown RBP10.34□□□□□ -0.75
HTT-204ENST00000508321 PGLSO95336 258 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 PIGNO95427 931 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 CPP00450 1065 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 EPOP01588 193 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 MMP2P08253 660 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 ADRB3P13945 408 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 HLA-DPA1P20036 260 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 XPAP23025 273 aaPredicted RBP10.34□□□□□ -0.75
HTT-204ENST00000508321 CD68P34810 354 aaPredicted RBP10.34□□□□□ -0.75
HTT-204ENST00000508321 DRD3P35462 400 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 NUDT1P36639 197 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 P2RY2P41231 377 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 TPMTP51580 245 aa10.34□□□□□ -0.75
HTT-204ENST00000508321 ADPRHP54922 357 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms