RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 TCF7L2Q9NQB0 619 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 WDR35Q9P2L0 1181 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 SCN1AP35498 2009 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 ALPK3Q96L96 1907 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 NCANO14594 1321 aa7.29□□□□□ -1.24
CLCN3-206ENST00000507875 MEGF11A6BM72 1044 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 KIAA0355O15063 1070 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 EIF4EBP3O60516 100 aaPredicted RBP7.28□□□□□ -1.24
CLCN3-206ENST00000507875 KRT19P08727 400 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 CXCR5P32302 372 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 CDH5P33151 784 aaPredicted RBP7.28□□□□□ -1.24
CLCN3-206ENST00000507875 PRKAA2P54646 552 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 ARL4CP56559 192 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 DEUP1Q05D60 604 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 SGCGQ13326 291 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 ACAD10Q6JQN1 1059 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 CNKSR3Q6P9H4 555 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 ESPNLQ6ZVH7 1005 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 MMGT1Q8N4V1 131 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 SPATA4Q8NEY3 305 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 FNIP1Q8TF40 1166 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 ASB15Q8WXK1 588 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 PLEKHG4BQ96PX9 1271 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 TUBGCP5Q96RT8 1024 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 MAK16Q9BXY0 300 aaKnown RBP7.28□□□□□ -1.24
CLCN3-206ENST00000507875 TRIM7Q9C029 511 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 C1GALT1Q9NS00 363 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 CISHQ9NSE2 258 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 SACM1LQ9NTJ5 587 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 RNF14Q9UBS8 474 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 TBX21Q9UL17 535 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 NOSIPQ9Y314 301 aaKnown RBP7.28□□□□□ -1.24
CLCN3-206ENST00000507875 ATP23Q9Y6H3 246 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 SCN5AQ14524 2016 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 A0A1W2PPL8 197 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 SHISA8B8ZZ34 492 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 CYP26A1O43174 497 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 ZNF254O75437 659 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 FUCA1P04066 466 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 CYP1A1P04798 512 aaPredicted RBP7.28□□□□□ -1.24
CLCN3-206ENST00000507875 SFTPCP11686 197 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 KRT5P13647 590 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 WARSP23381 471 aaKnown RBP7.28□□□□□ -1.24
CLCN3-206ENST00000507875 ACTN2P35609 894 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 PAFAH1B1P43034 410 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 NKX6-1P78426 367 aaPredicted RBP7.28□□□□□ -1.24
CLCN3-206ENST00000507875 C2orf54Q08AI8 447 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 LRRC74AQ0VAA2 488 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 MMEL1Q495T6 779 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 GLB1LQ6UWU2 654 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 GAREM2Q75VX8 874 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 CCDC80Q76M96 950 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 PPP1R3BQ86XI6 285 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 SYCE1Q8N0S2 351 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 GLB1L3Q8NCI6 653 aaPredicted RBP7.28□□□□□ -1.24
CLCN3-206ENST00000507875 BADQ92934 168 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 PSMB7Q99436 277 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 TMEM175Q9BSA9 504 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 PI4K2AQ9BTU6 479 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 HIPK3Q9H422 1215 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 PADI4Q9UM07 663 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 COL4A6Q14031 1691 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 TTC3P53804 2025 aa7.28□□□□□ -1.24
CLCN3-206ENST00000507875 ARL5CA6NH57 179 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 KPNA7A9QM74 516 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 PTGESO14684 152 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 CHRNB2P17787 502 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 MC4RP32245 332 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 LHX1P48742 406 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 AARSP49588 968 aaKnown RBP eCLIP7.27□□□□□ -1.24
CLCN3-206ENST00000507875 CCR5P51681 352 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 GSCP56915 257 aaPredicted RBP7.27□□□□□ -1.24
CLCN3-206ENST00000507875 TAP1Q03518 808 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 FPGSQ05932 587 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 MBTPS1Q14703 1052 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 WDR72Q3MJ13 1102 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 CFAP221Q4G0U5 840 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 ARHGAP17Q68EM7 881 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 DCLRE1AQ6PJP8 1040 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 SLCO4C1Q6ZQN7 724 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 PHF13Q86YI8 300 aaPredicted RBP7.27□□□□□ -1.24
CLCN3-206ENST00000507875 SHISA5Q8N114 240 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 CRYBG2Q8N1P7 616 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 TMEM199Q8N511 208 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 LNX1Q8TBB1 728 aaPredicted RBP7.27□□□□□ -1.24
CLCN3-206ENST00000507875 CTNNBL1Q8WYA6 563 aaPredicted RBP7.27□□□□□ -1.24
CLCN3-206ENST00000507875 COG8Q96MW5 612 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 KCNC2Q96PR1 638 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 RC3H2Q9HBD1 1191 aaKnown RBP7.27□□□□□ -1.24
CLCN3-206ENST00000507875 WASH6PQ9NQA3 447 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 USP36Q9P275 1121 aaKnown RBP7.27□□□□□ -1.24
CLCN3-206ENST00000507875 CPSF2Q9P2I0 782 aaKnown RBP7.27□□□□□ -1.24
CLCN3-206ENST00000507875 SSX2IPQ9Y2D8 614 aa7.27□□□□□ -1.24
CLCN3-206ENST00000507875 PATJQ8NI35 1801 aa7.27□□□□□ -1.25
CLCN3-206ENST00000507875 RANBP2P49792 3224 aaKnown RBP7.27□□□□□ -1.25
CLCN3-206ENST00000507875 TRIOBPQ9H2D6 2365 aa7.27□□□□□ -1.25
CLCN3-206ENST00000507875 GRID2IPA4D2P6 1211 aa7.27□□□□□ -1.25
CLCN3-206ENST00000507875 TRIM43BA6NCK2 446 aa7.27□□□□□ -1.25
CLCN3-206ENST00000507875 H0YC42 278 aa7.27□□□□□ -1.25
CLCN3-206ENST00000507875 PIP5K1BO14986 540 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms