RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 OSBPL9Q96SU4 736 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 ACOX2Q99424 681 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 OMDQ99983 421 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 MAGEB5Q9BZ81 275 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 ZDHHC5Q9C0B5 715 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 TRABDQ9H4I3 376 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 SCUBE2Q9NQ36 999 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 RBM22Q9NW64 420 aaKnown RBP eCLIP8.56□□□□□ -1.04
PDGFC-205ENST00000506880 FBXL12Q9NXK8 326 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 HACD3Q9P035 362 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 TFR2Q9UP52 801 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 TNRC6BQ9UPQ9 1833 aaKnown RBP8.56□□□□□ -1.04
PDGFC-205ENST00000506880 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 IGHV1OR15-9A0A0B4J2B8 117 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 FAM86C2PA6NEL3 165 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 H7C0C1 242 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 KRIT1O00522 736 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 TRAFD1O14545 582 aaPredicted RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 SMAD6O43541 496 aaKnown RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 LATO43561 262 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 DFNA5O60443 496 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 LEFTY1O75610 366 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 IL1BP01584 269 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 CYP2A6P11509 494 aaPredicted RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 GNSP15586 552 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 HLA-DPA1P20036 260 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 ATP5OP48047 213 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 GRIA4P48058 902 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 MARCKSL1P49006 195 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 GEMP55040 296 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 RPS21P63220 83 aaKnown RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 TUBB4BP68371 445 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 OTUD4Q01804 1114 aaKnown RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 SLC10A7Q0GE19 358 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 AP1B1Q10567 949 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 TCF15Q12870 199 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 OASLQ15646 514 aaKnown RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 PARP6Q2NL67 630 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 ARMC12Q5T9G4 340 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 KAZNQ674X7 775 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 PMS2CLQ68D20 193 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 CCDC70Q6NSX1 233 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 KIAA1211LQ6NV74 962 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 PKN3Q6P5Z2 889 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 FBXL19Q6PCT2 694 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 NYAP1Q6ZVC0 841 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 USP45Q70EL2 814 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 LINC00523Q86TU6 105 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 MMAAQ8IVH4 418 aaKnown RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 SFTPA1Q8IWL2 248 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 PGBD3Q8N328 593 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 SLC35F6Q8N357 371 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 TSEN2Q8NCE0 465 aaKnown RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 ATL2Q8NHH9 583 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 PEX13Q92968 403 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 SPATA13Q96N96 652 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 LENG8Q96PV6 779 aaPredicted RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 HHIPQ96QV1 700 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 MCCC1Q96RQ3 725 aaPredicted RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 FRMD8Q9BZ67 464 aaPredicted RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 GBA3Q9H227 469 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 GOLPH3Q9H4A6 298 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 KLHL11Q9NVR0 708 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 PAK5Q9P286 719 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 NFKBIL1Q9UBC1 381 aaPredicted RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 FAM153AQ9UHL3 310 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 EVLQ9UI08 416 aaPredicted RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 FCF1Q9Y324 198 aaKnown RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 CABIN1Q9Y6J0 2220 aa8.55□□□□□ -1.04
PDGFC-205ENST00000506880 PTPRZ1P23471 2315 aaPredicted RBP8.55□□□□□ -1.04
PDGFC-205ENST00000506880 KNL1Q8NG31 2342 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 FAM170AA1A519 330 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 METTL12A8MUP2 240 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 UPK3BL1B0FP48 263 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 UPK3BL2E5RIL1 263 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 AREL1O15033 823 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 YKT6O15498 198 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 LIASO43766 372 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 FZD6O60353 706 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 SEMA4FO95754 770 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 GAS8O95995 478 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 LMNAP02545 664 aaKnown RBP8.54□□□□□ -1.04
PDGFC-205ENST00000506880 FGGP02679 453 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 RETP07949 1114 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 HLA-EP13747 358 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 TNNT1P13805 278 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 ADRB3P13945 408 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 COL9A1P20849 921 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 XPAP23025 273 aaPredicted RBP8.54□□□□□ -1.04
PDGFC-205ENST00000506880 GLDCP23378 1020 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 PTPN3P26045 913 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 DRD3P35462 400 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 SCNN1BP51168 640 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 CKAP4Q07065 602 aaKnown RBP8.54□□□□□ -1.04
PDGFC-205ENST00000506880 UGP2Q16851 508 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 TMEM52BQ4KMG9 183 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 SETMARQ53H47 684 aaPredicted RBP8.54□□□□□ -1.04
PDGFC-205ENST00000506880 AGBL4Q5VU57 503 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 NAPEPLDQ6IQ20 393 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 DARS2Q6PI48 645 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms