RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 LRBAP50851 2863 aa6.12□□□□□ -1.43
GYPB-204ENST00000504951 FAM237AA0A1B0GTK4 181 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 B4E171 279 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 F5H5T6 163 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 PIK3R2O00459 728 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 RAD51BO15315 384 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 NUDT21O43809 227 aaKnown RBP6.11□□□□□ -1.43
GYPB-204ENST00000504951 CALCAP01258 141 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 APOEP02649 317 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 MYL1P05976 194 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 ADRB3P13945 408 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 PDGFRAP16234 1089 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 TNFRSF8P28908 595 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 PSMC2P35998 433 aaKnown RBP6.11□□□□□ -1.43
GYPB-204ENST00000504951 ETV5P41161 510 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 TSPAN7P41732 249 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 SYKP43405 635 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 ARSDP51689 593 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 NEK3P51956 506 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 HK3P52790 923 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 YWHAEP62258 255 aaKnown RBP6.11□□□□□ -1.43
GYPB-204ENST00000504951 NUCB2P80303 420 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 PPARDQ03181 441 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 DHX9Q08211 1270 aaKnown RBP6.11□□□□□ -1.43
GYPB-204ENST00000504951 SGCGQ13326 291 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 ADAM9Q13443 819 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 GOLGA7BQ2TAP0 167 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 ACCSLQ4AC99 568 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 CBWD6Q4V339 395 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 LACTB2Q53H82 288 aaPredicted RBP6.11□□□□□ -1.43
GYPB-204ENST00000504951 CBWD3Q5JTY5 395 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 EFHC1Q5JVL4 640 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 RABGAP1LQ5R372 815 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 CBWD5Q5RIA9 395 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 TPRG1LQ5T0D9 272 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 CERCAMQ5T4B2 595 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 ATL3Q6DD88 541 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 PMF1Q6P1K2 205 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 Q6ZVU0 165 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 MAMDC2Q7Z304 686 aaPredicted RBP6.11□□□□□ -1.43
GYPB-204ENST00000504951 SETD3Q86TU7 594 aaPredicted RBP6.11□□□□□ -1.43
GYPB-204ENST00000504951 VASH2Q86V25 355 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 C17orf82Q86X59 251 aaPredicted RBP6.11□□□□□ -1.43
GYPB-204ENST00000504951 GKN2Q86XP6 184 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 CCNJLQ8IV13 435 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 PARP9Q8IXQ6 854 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 PHACTR4Q8IZ21 702 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 LGI2Q8N0V4 545 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 GUF1Q8N442 669 aaKnown RBP6.11□□□□□ -1.43
GYPB-204ENST00000504951 UBR7Q8N806 425 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 ATP6V0D2Q8N8Y2 350 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 FBXL13Q8NEE6 735 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 UBA3Q8TBC4 463 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 STK32AQ8WU08 396 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 TFAP2BQ92481 460 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 KLK6Q92876 244 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 CCDC74AQ96AQ1 378 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 ISG20Q96AZ6 181 aaKnown RBP6.11□□□□□ -1.43
GYPB-204ENST00000504951 ARHGEF26Q96DR7 871 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 ABHD17AQ96GS6 310 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 TEFMQ96QE5 360 aaKnown RBP6.11□□□□□ -1.43
GYPB-204ENST00000504951 DPYSL5Q9BPU6 564 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 ZSWIM1Q9BR11 485 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 C2orf49Q9BVC5 232 aaPredicted RBP6.11□□□□□ -1.43
GYPB-204ENST00000504951 EDEM3Q9BZQ6 932 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 RETREG1Q9H6L5 497 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 FZD3Q9NPG1 666 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 PRDM8Q9NQV8 689 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 RAB20Q9NX57 234 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 PDP2Q9P2J9 529 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 CFAP45Q9UL16 551 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 DGKBQ9Y6T7 804 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 ESPL1Q14674 2120 aa6.11□□□□□ -1.43
GYPB-204ENST00000504951 PRR19A6NJB7 356 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 KPNA3O00505 521 aaPredicted RBP6.1□□□□□ -1.43
GYPB-204ENST00000504951 AREL1O15033 823 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 CASC3O15234 703 aaKnown RBP6.1□□□□□ -1.43
GYPB-204ENST00000504951 PMM2O15305 246 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 ZW10O43264 779 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 MTSS1O43312 755 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 STX10O60499 249 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 VPS4BO75351 444 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 ZNF821O75541 412 aaPredicted RBP6.1□□□□□ -1.43
GYPB-204ENST00000504951 AGFG2O95081 481 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 CPNE6O95741 557 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 RPLP0P05388 317 aaKnown RBP6.1□□□□□ -1.43
GYPB-204ENST00000504951 GLI1P08151 1106 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 HOXC4P09017 264 aaPredicted RBP6.1□□□□□ -1.43
GYPB-204ENST00000504951 KRT13P13646 458 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 HGFP14210 728 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 ITIH1P19827 911 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 MAP4P27816 1152 aaKnown RBP6.1□□□□□ -1.43
GYPB-204ENST00000504951 UGT1A3P35503 534 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 DCTP40126 519 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 ACADSBP45954 432 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 MXI1P50539 228 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 SUOXP51687 545 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 THOP1P52888 689 aa6.1□□□□□ -1.43
GYPB-204ENST00000504951 PMS1P54277 932 aaKnown RBP6.1□□□□□ -1.43
GYPB-204ENST00000504951 CDH4P55283 916 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms